Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0295
         (501 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16V67 Cluster: Putative uncharacterized protein; n=1; ...    32   6.3  
UniRef50_A2DN19 Cluster: Putative uncharacterized protein; n=1; ...    32   6.3  

>UniRef50_Q16V67 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 565

 Score = 32.3 bits (70), Expect = 6.3
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = +3

Query: 447 NTQLSLDDLAPPSVL 491
           NTQLSLDDL PPSVL
Sbjct: 508 NTQLSLDDLGPPSVL 522


>UniRef50_A2DN19 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1012

 Score = 32.3 bits (70), Expect = 6.3
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +3

Query: 351 VIKLN*NIHNFFFQPVVENVPTIADYAPPSVLNTQLSLDDLAPPSVLQ 494
           +IKL  N  + F++PV   + TI D  P  V++  L + +  PP  +Q
Sbjct: 761 IIKLAINFPDGFYRPVARIITTICDSYPEFVVSFHLIILESVPPRFIQ 808


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 415,941,582
Number of Sequences: 1657284
Number of extensions: 6844238
Number of successful extensions: 14800
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14797
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)