Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0295
         (501 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    28   0.054
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.2  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 27.9 bits (59), Expect = 0.054
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -1

Query: 219 YCSLLKFYFINCFP*LLFTFYYI 151
           Y SLL+  F+ C+   LFT YYI
Sbjct: 137 YVSLLQLVFVFCYFIYLFTVYYI 159



 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 320 KAKTLKEKIT*YILNFNYKD 261
           KAK  K  I  Y +N+N+K+
Sbjct: 112 KAKFGKLLINLYTINYNFKE 131


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 326 KQKAKTLKEKIT 291
           K+K KT+KEK T
Sbjct: 263 KKKKKTIKEKYT 274


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,789
Number of Sequences: 336
Number of extensions: 2049
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)