Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0295
         (501 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D87342-1|BAB70690.1|  312|Homo sapiens HP-041 protein.                 29   9.1  
D14446-1|BAA03336.1|  312|Homo sapiens unknown protein precursor...    29   9.1  
DQ086826-1|AAY68216.1|  312|Homo sapiens fibrinogen-like 1 protein.    29   9.1  
BT006635-1|AAP35281.1|  312|Homo sapiens fibrinogen-like 1 protein.    29   9.1  
BC007047-1|AAH07047.1|  312|Homo sapiens fibrinogen-like 1 protein.    29   9.1  
AF168954-1|AAM88911.1|  312|Homo sapiens LFIRE1 protein.               29   9.1  

>D87342-1|BAB70690.1|  312|Homo sapiens HP-041 protein.
          Length = 312

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 213 NNIMWLTWGTWGYWVKVFVIKV 278
           N I+W TW  W Y +K  V+K+
Sbjct: 281 NGIVWYTWHGWWYSLKSVVMKI 302


>D14446-1|BAA03336.1|  312|Homo sapiens unknown protein precursor
           protein.
          Length = 312

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 213 NNIMWLTWGTWGYWVKVFVIKV 278
           N I+W TW  W Y +K  V+K+
Sbjct: 281 NGIVWYTWHGWWYSLKSVVMKI 302


>DQ086826-1|AAY68216.1|  312|Homo sapiens fibrinogen-like 1 protein.
          Length = 312

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 213 NNIMWLTWGTWGYWVKVFVIKV 278
           N I+W TW  W Y +K  V+K+
Sbjct: 281 NGIVWYTWHGWWYSLKSVVMKI 302


>BT006635-1|AAP35281.1|  312|Homo sapiens fibrinogen-like 1 protein.
          Length = 312

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 213 NNIMWLTWGTWGYWVKVFVIKV 278
           N I+W TW  W Y +K  V+K+
Sbjct: 281 NGIVWYTWHGWWYSLKSVVMKI 302


>BC007047-1|AAH07047.1|  312|Homo sapiens fibrinogen-like 1 protein.
          Length = 312

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 213 NNIMWLTWGTWGYWVKVFVIKV 278
           N I+W TW  W Y +K  V+K+
Sbjct: 281 NGIVWYTWHGWWYSLKSVVMKI 302


>AF168954-1|AAM88911.1|  312|Homo sapiens LFIRE1 protein.
          Length = 312

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 213 NNIMWLTWGTWGYWVKVFVIKV 278
           N I+W TW  W Y +K  V+K+
Sbjct: 281 NGIVWYTWHGWWYSLKSVVMKI 302


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,572,314
Number of Sequences: 237096
Number of extensions: 1054993
Number of successful extensions: 2550
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2550
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)