Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0293
         (789 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.2  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   2.1  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   2.1  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   6.4  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   6.4  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   8.5  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   8.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.5  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 644 ASPTVL*AVA*LFSIKYK*ASRDETNPPKQTPTNAP 751
           +SP+VL A+  L    +   SR  ++ P   PT AP
Sbjct: 724 SSPSVLNAIEKLIEKSFDSRSRQNSSFPGHGPTTAP 759


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +3

Query: 441 AVNPKFALYNAPVSAPAVVYSMRLYLHDMQILLWLSN*TFL*KYLISIPTCRHLW 605
           A NPK A Y +P+    +V        D Q+  W+SN     K ++ +PT    W
Sbjct: 252 ARNPKEADYPSPLYE--LVDRRNDENIDAQVKYWMSNGAPSAKIVLGLPTFGRAW 304


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +3

Query: 522 DMQILLWLSN*TFL*KYLISIPTCRHLWQIQ 614
           D  +  WLS      K  +S+P   H W +Q
Sbjct: 226 DSSVQSWLSGGASASKVTLSVPFYGHSWYLQ 256


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 710 DETNPPKQTPTNAPHN 757
           D++N P+  P N  HN
Sbjct: 222 DDSNIPQNNPKNKQHN 237


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/23 (39%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = -3

Query: 325 KIKESRTDH-YNQAIEKSSKIKH 260
           K ++ +  H   Q++EKSSK+K+
Sbjct: 123 KCRQQQKQHNQQQSVEKSSKLKN 145


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = -3

Query: 559 NVQFDSHNNICISWRYNLIEYT--TAGALTGALYKANLGL 446
           NV   S   +C  +   L +    TAG L GA+Y  +L L
Sbjct: 235 NVTVISWQAVCTFYNILLCDSVAHTAGELLGAVYSLDLEL 274


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = -3

Query: 559 NVQFDSHNNICISWRYNLIEYT--TAGALTGALYKANLGL 446
           NV   S   +C  +   L +    TAG L GA+Y  +L L
Sbjct: 235 NVTVISWQAVCTFYNILLCDSVAHTAGELLGAVYSLDLEL 274


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = -3

Query: 559 NVQFDSHNNICISWRYNLIEYT--TAGALTGALYKANLGL 446
           NV   S   +C  +   L +    TAG L GA+Y  +L L
Sbjct: 555 NVTVISWQAVCTFYNILLCDSVAHTAGELLGAVYSLDLEL 594


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,326
Number of Sequences: 336
Number of extensions: 4153
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)