Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0293
         (789 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    27   0.87 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   2.0  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   8.1  
AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    23   8.1  

>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 26.6 bits (56), Expect = 0.87
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 522 DMQILLWLSN*TFL*KYLISIPTCRHLWQI 611
           D Q+ LWL+N     K ++SIPT    W++
Sbjct: 276 DGQVRLWLTNNAPASKLIVSIPTFGRGWKM 305


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +3

Query: 360 PVIFNIPIIKSPPIVLNTAPREPPTIIAVNPKFALYNAPVSAPAVV 497
           P +   P + +P  V +   R  PT++A +P      APV   +VV
Sbjct: 54  PTVLGGPNLFAPSAVSSQLQRPQPTVLAASPAPQPSLAPVVPSSVV 99


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 736 TNKCTAQCGCTTVCSSGE 789
           T+KCTA   C   C+S E
Sbjct: 934 TSKCTASTTCKKNCASDE 951


>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 5/17 (29%), Positives = 13/17 (76%)
 Frame = +2

Query: 14  YNEVLMYNTYNIYKHKI 64
           +  ++MY++YN ++H +
Sbjct: 342 FGNIIMYSSYNKFRHNV 358


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 816,870
Number of Sequences: 2352
Number of extensions: 16629
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)