Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0293
(789 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR533524-1|CAG38555.1| 285|Homo sapiens C3orf1 protein. 47 9e-05
BC012341-1|AAH12341.1| 285|Homo sapiens chromosome 3 open readi... 47 9e-05
AY358633-1|AAQ88996.1| 285|Homo sapiens C3orf1 protein. 47 9e-05
AL390094-1|CAB98251.1| 220|Homo sapiens c3orf1 hypothetical pro... 47 9e-05
AL390090-1|CAB98212.1| 285|Homo sapiens c3orf1 hypothetical pro... 47 9e-05
AL390077-1|CAB98201.1| 285|Homo sapiens c3orf1 hypothetical pro... 47 9e-05
AF210057-1|AAG43510.1| 285|Homo sapiens C3orf1 protein. 47 9e-05
AF139077-1|AAF62372.1| 285|Homo sapiens M5-14 protein. 47 9e-05
CR457158-1|CAG33439.1| 285|Homo sapiens C3orf1 protein. 45 4e-04
>CR533524-1|CAG38555.1| 285|Homo sapiens C3orf1 protein.
Length = 285
Score = 46.8 bits (106), Expect = 9e-05
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = -1
Query: 690 FIENNQATAYKTVGDAKKKLQDYVTIGFAKGAYKWGWKLSIFTGMFSLIATTISAYR 520
+IE +QA Y DA + T GF + ++WGW+ ++F +F+ + T+++ YR
Sbjct: 104 YIEQSQAEIYHNRFDAVQSAHRAATRGFIRYGWRWGWRTAVFVTIFNTVNTSLNVYR 160
Score = 37.5 bits (83), Expect = 0.055
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = -3
Query: 508 LIEYTTAGALTGALYKANLGLTAMIVGGSLGAV 410
L + AGA+TG+L++ N+GL ++ GG +GA+
Sbjct: 165 LSHFVIAGAVTGSLFRINVGLRGLVAGGIIGAL 197
>BC012341-1|AAH12341.1| 285|Homo sapiens chromosome 3 open reading
frame 1 protein.
Length = 285
Score = 46.8 bits (106), Expect = 9e-05
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = -1
Query: 690 FIENNQATAYKTVGDAKKKLQDYVTIGFAKGAYKWGWKLSIFTGMFSLIATTISAYR 520
+IE +QA Y DA + T GF + ++WGW+ ++F +F+ + T+++ YR
Sbjct: 104 YIEQSQAEIYHNRFDAVQSAHRAATRGFIRYGWRWGWRTAVFVTIFNTVNTSLNVYR 160
Score = 37.5 bits (83), Expect = 0.055
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = -3
Query: 508 LIEYTTAGALTGALYKANLGLTAMIVGGSLGAV 410
L + AGA+TG+L++ N+GL ++ GG +GA+
Sbjct: 165 LSHFVIAGAVTGSLFRINVGLRGLVAGGIIGAL 197
>AY358633-1|AAQ88996.1| 285|Homo sapiens C3orf1 protein.
Length = 285
Score = 46.8 bits (106), Expect = 9e-05
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = -1
Query: 690 FIENNQATAYKTVGDAKKKLQDYVTIGFAKGAYKWGWKLSIFTGMFSLIATTISAYR 520
+IE +QA Y DA + T GF + ++WGW+ ++F +F+ + T+++ YR
Sbjct: 104 YIEQSQAEIYHNRFDAVQSAHRAATRGFIRYGWRWGWRTAVFVTIFNTVNTSLNVYR 160
Score = 37.5 bits (83), Expect = 0.055
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = -3
Query: 508 LIEYTTAGALTGALYKANLGLTAMIVGGSLGAV 410
L + AGA+TG+L++ N+GL ++ GG +GA+
Sbjct: 165 LSHFVIAGAVTGSLFRINVGLRGLVAGGIIGAL 197
>AL390094-1|CAB98251.1| 220|Homo sapiens c3orf1 hypothetical
protein, M5-14 alternatively spliced product, similar to
(A protein.
Length = 220
Score = 46.8 bits (106), Expect = 9e-05
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = -1
Query: 690 FIENNQATAYKTVGDAKKKLQDYVTIGFAKGAYKWGWKLSIFTGMFSLIATTISAYR 520
+IE +QA Y DA + T GF + ++WGW+ ++F +F+ + T+++ YR
Sbjct: 39 YIEQSQAEIYHNRFDAVQSAHRAATRGFIRYGWRWGWRTAVFVTIFNTVNTSLNVYR 95
Score = 37.5 bits (83), Expect = 0.055
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = -3
Query: 508 LIEYTTAGALTGALYKANLGLTAMIVGGSLGAV 410
L + AGA+TG+L++ N+GL ++ GG +GA+
Sbjct: 100 LSHFVIAGAVTGSLFRINVGLRGLVAGGIIGAL 132
>AL390090-1|CAB98212.1| 285|Homo sapiens c3orf1 hypothetical
protein, M5-14 similar to (AE003703)140up gene product
[Dro protein.
Length = 285
Score = 46.8 bits (106), Expect = 9e-05
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = -1
Query: 690 FIENNQATAYKTVGDAKKKLQDYVTIGFAKGAYKWGWKLSIFTGMFSLIATTISAYR 520
+IE +QA Y DA + T GF + ++WGW+ ++F +F+ + T+++ YR
Sbjct: 104 YIEQSQAEIYHNRFDAVQSAHRAATRGFIRYGWRWGWRTAVFVTIFNTVNTSLNVYR 160
Score = 37.5 bits (83), Expect = 0.055
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = -3
Query: 508 LIEYTTAGALTGALYKANLGLTAMIVGGSLGAV 410
L + AGA+TG+L++ N+GL ++ GG +GA+
Sbjct: 165 LSHFVIAGAVTGSLFRINVGLRGLVAGGIIGAL 197
>AL390077-1|CAB98201.1| 285|Homo sapiens c3orf1 hypothetical
protein, M5-14 similar to (AE003703)140up gene product
[Dro protein.
Length = 285
Score = 46.8 bits (106), Expect = 9e-05
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = -1
Query: 690 FIENNQATAYKTVGDAKKKLQDYVTIGFAKGAYKWGWKLSIFTGMFSLIATTISAYR 520
+IE +QA Y DA + T GF + ++WGW+ ++F +F+ + T+++ YR
Sbjct: 104 YIEQSQAEIYHNRFDAVQSAHRAATRGFIRYGWRWGWRTAVFVTIFNTVNTSLNVYR 160
Score = 37.5 bits (83), Expect = 0.055
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = -3
Query: 508 LIEYTTAGALTGALYKANLGLTAMIVGGSLGAV 410
L + AGA+TG+L++ N+GL ++ GG +GA+
Sbjct: 165 LSHFVIAGAVTGSLFRINVGLRGLVAGGIIGAL 197
>AF210057-1|AAG43510.1| 285|Homo sapiens C3orf1 protein.
Length = 285
Score = 46.8 bits (106), Expect = 9e-05
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = -1
Query: 690 FIENNQATAYKTVGDAKKKLQDYVTIGFAKGAYKWGWKLSIFTGMFSLIATTISAYR 520
+IE +QA Y DA + T GF + ++WGW+ ++F +F+ + T+++ YR
Sbjct: 104 YIEQSQAEIYHNRFDAVQSAHRAATRGFIRYGWRWGWRTAVFVTIFNTVNTSLNVYR 160
Score = 37.5 bits (83), Expect = 0.055
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = -3
Query: 508 LIEYTTAGALTGALYKANLGLTAMIVGGSLGAV 410
L + AGA+TG+L++ N+GL ++ GG +GA+
Sbjct: 165 LSHFVIAGAVTGSLFRINVGLRGLVAGGIIGAL 197
>AF139077-1|AAF62372.1| 285|Homo sapiens M5-14 protein.
Length = 285
Score = 46.8 bits (106), Expect = 9e-05
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = -1
Query: 690 FIENNQATAYKTVGDAKKKLQDYVTIGFAKGAYKWGWKLSIFTGMFSLIATTISAYR 520
+IE +QA Y DA + T GF + ++WGW+ ++F +F+ + T+++ YR
Sbjct: 104 YIEQSQAEIYHNRFDAVQSAHRAATRGFIRYGWRWGWRTAVFVTIFNTVNTSLNVYR 160
Score = 37.5 bits (83), Expect = 0.055
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = -3
Query: 508 LIEYTTAGALTGALYKANLGLTAMIVGGSLGAV 410
L + AGA+TG+L++ N+GL ++ GG +GA+
Sbjct: 165 LSHFVIAGAVTGSLFRINVGLRGLVAGGIIGAL 197
>CR457158-1|CAG33439.1| 285|Homo sapiens C3orf1 protein.
Length = 285
Score = 44.8 bits (101), Expect = 4e-04
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = -1
Query: 690 FIENNQATAYKTVGDAKKKLQDYVTIGFAKGAYKWGWKLSIFTGMFSLIATTISAYR 520
+IE +QA Y DA + T GF + ++WGW+ ++F +F+ + T+ + YR
Sbjct: 104 YIEQSQAEIYHNRFDAVQSAHRAATRGFIRYGWRWGWRTAVFVTIFNTVNTSPNVYR 160
Score = 37.5 bits (83), Expect = 0.055
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = -3
Query: 508 LIEYTTAGALTGALYKANLGLTAMIVGGSLGAV 410
L + AGA+TG+L++ N+GL ++ GG +GA+
Sbjct: 165 LSHFVIAGAVTGSLFRINVGLRGLVAGGIIGAL 197
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,453,619
Number of Sequences: 237096
Number of extensions: 2152008
Number of successful extensions: 4375
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4360
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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