Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0291
         (815 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025818-1|ABF85718.1| 1416|Drosophila melanogaster IP03271p pro...    32   1.1  
BT010019-1|AAQ22488.1| 1506|Drosophila melanogaster RE10624p pro...    32   1.1  
AF053358-1|AAC35280.1| 1383|Drosophila melanogaster guanine nucl...    32   1.1  
AE014298-952|AAF46200.2| 1571|Drosophila melanogaster CG3126-PA,...    32   1.1  
AE014298-951|AAO41635.1| 1520|Drosophila melanogaster CG3126-PB,...    32   1.1  
AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-P...    31   2.5  
AJ252268-1|CAB66144.1| 1403|Drosophila melanogaster capicua prot...    30   4.4  
AE014297-2772|AAF55751.3| 1403|Drosophila melanogaster CG5067-PA...    30   4.4  

>BT025818-1|ABF85718.1| 1416|Drosophila melanogaster IP03271p
           protein.
          Length = 1416

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
 Frame = +3

Query: 330 SCTRPSGRWCELPSA---GLCLNAS---KAEASLAESGKDMLTVEPRESGGSKQCDFTSR 491
           S T  S +   LP A    + LN+     +  SL   G D L+V  R    + QC F S 
Sbjct: 466 SSTSTSNQASPLPYAQSHNISLNSDLDCSSNISLLNYGVDRLSVRSRSPDENSQCSFDSA 525

Query: 492 VSHSKRRRD 518
           ++HS+   D
Sbjct: 526 LNHSREEED 534


>BT010019-1|AAQ22488.1| 1506|Drosophila melanogaster RE10624p
           protein.
          Length = 1506

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
 Frame = +3

Query: 330 SCTRPSGRWCELPSA---GLCLNAS---KAEASLAESGKDMLTVEPRESGGSKQCDFTSR 491
           S T  S +   LP A    + LN+     +  SL   G D L+V  R    + QC F S 
Sbjct: 570 SSTSTSNQASPLPYAQSHNISLNSDLDCSSNISLLNYGVDRLSVRSRSPDENSQCSFDSA 629

Query: 492 VSHSKRRRD 518
           ++HS+   D
Sbjct: 630 LNHSREEED 638


>AF053358-1|AAC35280.1| 1383|Drosophila melanogaster guanine
           nucleotide exchange factorDC3G protein.
          Length = 1383

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
 Frame = +3

Query: 330 SCTRPSGRWCELPSA---GLCLNAS---KAEASLAESGKDMLTVEPRESGGSKQCDFTSR 491
           S T  S +   LP A    + LN+     +  SL   G D L+V  R    + QC F S 
Sbjct: 432 SSTSTSNQASPLPYAQSHNISLNSDLDCSSNISLLNYGVDRLSVRSRSPDENSQCSFDSA 491

Query: 492 VSHSKRRRD 518
           ++HS+   D
Sbjct: 492 LNHSREEED 500


>AE014298-952|AAF46200.2| 1571|Drosophila melanogaster CG3126-PA,
           isoform A protein.
          Length = 1571

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
 Frame = +3

Query: 330 SCTRPSGRWCELPSA---GLCLNAS---KAEASLAESGKDMLTVEPRESGGSKQCDFTSR 491
           S T  S +   LP A    + LN+     +  SL   G D L+V  R    + QC F S 
Sbjct: 570 SSTSTSNQASPLPYAQSHNISLNSDLDCSSNISLLNYGVDRLSVRSRSPDENSQCSFDSA 629

Query: 492 VSHSKRRRD 518
           ++HS+   D
Sbjct: 630 LNHSREEED 638


>AE014298-951|AAO41635.1| 1520|Drosophila melanogaster CG3126-PB,
           isoform B protein.
          Length = 1520

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
 Frame = +3

Query: 330 SCTRPSGRWCELPSA---GLCLNAS---KAEASLAESGKDMLTVEPRESGGSKQCDFTSR 491
           S T  S +   LP A    + LN+     +  SL   G D L+V  R    + QC F S 
Sbjct: 570 SSTSTSNQASPLPYAQSHNISLNSDLDCSSNISLLNYGVDRLSVRSRSPDENSQCSFDSA 629

Query: 492 VSHSKRRRD 518
           ++HS+   D
Sbjct: 630 LNHSREEED 638


>AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-PA
           protein.
          Length = 1333

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = -3

Query: 348 RSAECMNQMSETAVPLVLSSITIATTSHQ*GKL 250
           +  EC  Q+S  ++ LV+S+IT+AT +H  G +
Sbjct: 701 QQCECHAQVSIASLLLVISAITVATNTHDYGNI 733


>AJ252268-1|CAB66144.1| 1403|Drosophila melanogaster capicua
           protein.
          Length = 1403

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = -2

Query: 505 FECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPADGSSHHR 350
           FE   +L     L    SR +T S + P +   AS L A  H+P + S+ HR
Sbjct: 7   FELGAKLYLQCLLSLSSSRSATPSYTSPVNHAGASPLNAIAHSPVNVSATHR 58


>AE014297-2772|AAF55751.3| 1403|Drosophila melanogaster CG5067-PA
           protein.
          Length = 1403

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = -2

Query: 505 FECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPADGSSHHR 350
           FE   +L     L    SR +T S + P +   AS L A  H+P + S+ HR
Sbjct: 7   FELGAKLYLQCLLSLSSSRSATPSYTSPVNHAGASPLNAIAHSPVNVSATHR 58


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,741,024
Number of Sequences: 53049
Number of extensions: 811978
Number of successful extensions: 2010
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2007
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)