Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0290
         (720 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q00802 Cluster: Low molecular mass 30 kDa lipoprotein 1...    54   5e-06
UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    46   0.001
UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-...    40   0.062
UniRef50_P19616 Cluster: Microvitellogenin precursor; n=3; Mandu...    38   0.33 

>UniRef50_Q00802 Cluster: Low molecular mass 30 kDa lipoprotein 19G1
           precursor; n=3; Bombyx mori|Rep: Low molecular mass 30
           kDa lipoprotein 19G1 precursor - Bombyx mori (Silk moth)
          Length = 256

 Score = 53.6 bits (123), Expect = 5e-06
 Identities = 21/26 (80%), Positives = 25/26 (96%)
 Frame = -3

Query: 709 GNRMAFGYSGRVVGSPEQYAWGIKAF 632
           G+RMA+GY+GRV+GSPE YAWGIKAF
Sbjct: 231 GHRMAWGYNGRVIGSPEHYAWGIKAF 256


>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 46.0 bits (104), Expect = 0.001
 Identities = 22/39 (56%), Positives = 25/39 (64%)
 Frame = +2

Query: 407 MVDGNHSPPGRPYARLPTRAIKKLITKFQNIIPLFKIQF 523
           M DGNHSP GRPYA LPTRA  KL + F  +I    + F
Sbjct: 1   MGDGNHSPSGRPYASLPTRAKMKLTSLFIFVIVALSLLF 39


>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
            protein; n=25; Arthropoda|Rep: Endonuclease and reverse
            transcriptase-like protein - Bombyx mori (Silk moth)
          Length = 986

 Score = 39.9 bits (89), Expect = 0.062
 Identities = 16/20 (80%), Positives = 20/20 (100%)
 Frame = +1

Query: 358  INGRKRLGSAPGIADVHGRR 417
            ++GR+RLGSAPGIA+VHGRR
Sbjct: 967  LSGRQRLGSAPGIAEVHGRR 986


>UniRef50_P19616 Cluster: Microvitellogenin precursor; n=3; Manduca
           sexta|Rep: Microvitellogenin precursor - Manduca sexta
           (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 249

 Score = 37.5 bits (83), Expect = 0.33
 Identities = 12/29 (41%), Positives = 21/29 (72%)
 Frame = -3

Query: 718 DTWGNRMAFGYSGRVVGSPEQYAWGIKAF 632
           D+ G+R  +G++G V+G+PE + W + AF
Sbjct: 221 DSMGDRQVWGHNGNVIGNPELFGWSVVAF 249


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,004,895
Number of Sequences: 1657284
Number of extensions: 12976281
Number of successful extensions: 32404
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32402
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)