Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0290
         (720 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72507-13|CAH60789.1|  515|Caenorhabditis elegans Hypothetical p...    32   0.47 
Z72507-10|CAA96629.1|  531|Caenorhabditis elegans Hypothetical p...    32   0.47 
Z70205-4|CAA94115.2|  528|Caenorhabditis elegans Hypothetical pr...    30   1.4  
AC024880-3|AAF60915.3|  675|Caenorhabditis elegans Hypothetical ...    30   1.9  
AL032632-8|CAA21592.2|  420|Caenorhabditis elegans Hypothetical ...    28   7.7  

>Z72507-13|CAH60789.1|  515|Caenorhabditis elegans Hypothetical
           protein F17C11.7b protein.
          Length = 515

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = -1

Query: 291 HDRDTS---RYGIRGRRDSNAMSHTRLITLMMCME*TLQTIAGHATTSNSLFHNSH 133
           H  +TS   RYG+     +   + TRL  L+ C E  + T+   +   NS++H+SH
Sbjct: 137 HGGETSVHKRYGVLSGETTCTENLTRLRKLLACKENGISTLLHPSKLYNSVYHSSH 192


>Z72507-10|CAA96629.1|  531|Caenorhabditis elegans Hypothetical
           protein F17C11.7a protein.
          Length = 531

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = -1

Query: 291 HDRDTS---RYGIRGRRDSNAMSHTRLITLMMCME*TLQTIAGHATTSNSLFHNSH 133
           H  +TS   RYG+     +   + TRL  L+ C E  + T+   +   NS++H+SH
Sbjct: 153 HGGETSVHKRYGVLSGETTCTENLTRLRKLLACKENGISTLLHPSKLYNSVYHSSH 208


>Z70205-4|CAA94115.2|  528|Caenorhabditis elegans Hypothetical
           protein C11H1.5 protein.
          Length = 528

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +1

Query: 616 MKSVLRKPLYPKRTARDFRPRGHCIRTPCGYPRC 717
           +K+     + PK   R +RPRG  +  P  YPRC
Sbjct: 455 IKNTCSDGIDPKFVKRWYRPRGSSVCVPYHYPRC 488


>AC024880-3|AAF60915.3|  675|Caenorhabditis elegans Hypothetical
           protein Y97E10AR.1 protein.
          Length = 675

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +2

Query: 140 LWNRLFEVVAC-PAIVCNVHSIHIINVMSR 226
           LWN  FE+    PA  CN    H++++MSR
Sbjct: 76  LWNEHFEIDGSYPATWCNEKPFHLVDLMSR 105


>AL032632-8|CAA21592.2|  420|Caenorhabditis elegans Hypothetical
           protein Y11D7A.13 protein.
          Length = 420

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -1

Query: 333 VLFSLHLYIFHQCEHDRDTSRYGIRGRRDSNAMSHT 226
           VLF  HLY+F +C +D     +    +    A  HT
Sbjct: 144 VLFDEHLYVFDKCSYDSKKRFFRCERKNTCPARIHT 179


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,370,805
Number of Sequences: 27780
Number of extensions: 327447
Number of successful extensions: 668
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)