Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0287
(699 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 24 1.6
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 24 1.6
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 24 1.6
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 24 1.6
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 24 1.6
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 24 1.6
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 24 1.6
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 22 4.9
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 6.4
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 6.4
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 1.6
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -2
Query: 698 SELTVERRSYRIVPNRARNETDTTLRLGRSAEGRRTRVRIQSET*DDFRECHIKY 534
+E+T R + ++ NET T + S+ R+R R T CH +Y
Sbjct: 184 NEITEHRTVLAVNIEKSENETKTCKKYAISSNSLRSRSRSFQRT----SSCHSRY 234
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 1.6
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -2
Query: 698 SELTVERRSYRIVPNRARNETDTTLRLGRSAEGRRTRVRIQSET*DDFRECHIKY 534
+E+T R + ++ NET T + S+ R+R R T CH +Y
Sbjct: 184 NEITEHRTVLAVNIEKSENETKTCKKYAISSNSLRSRSRSFQRT----SSCHSRY 234
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 1.6
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -2
Query: 698 SELTVERRSYRIVPNRARNETDTTLRLGRSAEGRRTRVRIQSET*DDFRECHIKY 534
+E+T R + ++ NET T + S+ R+R R T CH +Y
Sbjct: 184 NEITEHRTVLAVNIEKSENETKTCKKYAISSNSLRSRSRSFQRT----SSCHSRY 234
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 1.6
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -2
Query: 698 SELTVERRSYRIVPNRARNETDTTLRLGRSAEGRRTRVRIQSET*DDFRECHIKY 534
+E+T R + ++ NET T + S+ R+R R T CH +Y
Sbjct: 184 NEITEHRTVLAVNIEKSENETKTCKKYAISSNSLRSRSRSFQRT----SSCHSRY 234
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 1.6
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -2
Query: 698 SELTVERRSYRIVPNRARNETDTTLRLGRSAEGRRTRVRIQSET*DDFRECHIKY 534
+E+T R + ++ NET T + S+ R+R R T CH +Y
Sbjct: 184 NEITEHRTVLAVNIEKSENETKTCKKYAISSNSLRSRSRSFQRT----SSCHSRY 234
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 23.8 bits (49), Expect = 1.6
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -2
Query: 698 SELTVERRSYRIVPNRARNETDTTLRLGRSAEGRRTRVRIQSET*DDFRECHIKY 534
+E+T R + ++ NET T + S+ R+R R T CH +Y
Sbjct: 184 NEITEHRTVLAVNIEKSENETKTCKKYAISSNSLRSRSRSFQRT----SSCHSRY 234
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.8 bits (49), Expect = 1.6
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -2
Query: 698 SELTVERRSYRIVPNRARNETDTTLRLGRSAEGRRTRVRIQSET*DDFRECHIKY 534
+E+T R + ++ NET T + S+ R+R R T CH +Y
Sbjct: 184 NEITEHRTVLAVNIEKSENETKTCKKYAISSNSLRSRSRSFQRT----SSCHSRY 234
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 22.2 bits (45), Expect = 4.9
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 130 PDLSAASSGHFGLPRRTLVFK 68
PDL+ S G GLP L +
Sbjct: 336 PDLAGTSQGSAGLPSAILAMR 356
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -3
Query: 199 SEPYLPSIGFHGTRTLRQKRKLFPDLSA 116
SE P+ HG R RQ+ + D +
Sbjct: 472 SENNYPTTSIHGDRLQRQREEALADFKS 499
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 6.4
Identities = 7/29 (24%), Positives = 16/29 (55%)
Frame = -3
Query: 310 LRIWVRTGATSPRTSLT*ISRSAESIRTP 224
++ W+ G T + +S+ +++RTP
Sbjct: 513 IKEWIERGTTKSMEAANIMSKLPKTVRTP 541
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,963
Number of Sequences: 438
Number of extensions: 5356
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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