Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0281
         (701 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81523-2|CAB04248.1|  928|Caenorhabditis elegans Hypothetical pr...    35   0.049
Z81523-1|CAB04241.1|  944|Caenorhabditis elegans Hypothetical pr...    35   0.049
Z81113-2|CAB03279.1|  510|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z22181-5|CAA80183.1|  619|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z92972-7|CAB07486.1|  402|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AL021466-1|CAA16282.1|  308|Caenorhabditis elegans Hypothetical ...    28   7.4  

>Z81523-2|CAB04248.1|  928|Caenorhabditis elegans Hypothetical
           protein F32H2.1b protein.
          Length = 928

 Score = 35.1 bits (77), Expect = 0.049
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
 Frame = -3

Query: 321 RSKPV-HWFQAIGNREQRWTVSS-ASLLTMLKNAQIFEQLSR-CTLREVSSSPRHVISYQ 151
           R K V  WF  +   E++WT S   +L T +KNA +  Q+   C+ R++ +S        
Sbjct: 117 REKQVLKWFDPMMKEEKKWTPSEIKTLRTSVKNALVAHQVQPWCSRRDIVASKLRDADIT 176

Query: 150 TSNADQQ 130
           TSN D++
Sbjct: 177 TSNFDRR 183


>Z81523-1|CAB04241.1|  944|Caenorhabditis elegans Hypothetical
           protein F32H2.1a protein.
          Length = 944

 Score = 35.1 bits (77), Expect = 0.049
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
 Frame = -3

Query: 321 RSKPV-HWFQAIGNREQRWTVSS-ASLLTMLKNAQIFEQLSR-CTLREVSSSPRHVISYQ 151
           R K V  WF  +   E++WT S   +L T +KNA +  Q+   C+ R++ +S        
Sbjct: 117 REKQVLKWFDPMMKEEKKWTPSEIKTLRTSVKNALVAHQVQPWCSRRDIVASKLRDADIT 176

Query: 150 TSNADQQ 130
           TSN D++
Sbjct: 177 TSNFDRR 183


>Z81113-2|CAB03279.1|  510|Caenorhabditis elegans Hypothetical
           protein T03F6.2 protein.
          Length = 510

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
 Frame = +1

Query: 115 WASFVLLVSIAGLVAYDVSRAGGNFPK---STTGKLFKDLGILEHSQQ 249
           W+SF    S A L  YD+++A   F         K F+D+G  E ++Q
Sbjct: 178 WSSFSTTRSFAWLDHYDITQASNRFESRQIDQENKKFRDVGKQERNEQ 225


>Z22181-5|CAA80183.1|  619|Caenorhabditis elegans Hypothetical
           protein ZK632.6 protein.
          Length = 619

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +1

Query: 64  FKDILDRMTSTRRNPWLWASFVLLVSIAGLVAYDV 168
           F+ I+D   +T   PWLWA ++L V +  LVA  V
Sbjct: 468 FQQIID---ATNEKPWLWAVYILCV-LLPLVAIGV 498


>Z92972-7|CAB07486.1|  402|Caenorhabditis elegans Hypothetical
           protein T19C9.8 protein.
          Length = 402

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +2

Query: 464 RVCSWS--CRQRSELCITAWSGLKKYSSDYYQIT 559
           RV  WS    +++   I  W G  KYSS+ Y IT
Sbjct: 308 RVSIWSDNFNEQTSQLIIEWPGYDKYSSNMYNIT 341


>AL021466-1|CAA16282.1|  308|Caenorhabditis elegans Hypothetical
           protein VF36H2L.1 protein.
          Length = 308

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = +3

Query: 261 TLSTSARGYLWLETNAPVYYAQTVEICRPYTQLSKDAFFIALKKA 395
           +L  S+  +L L T  P  +  ++ +C    +LS+ A+F+ LKKA
Sbjct: 45  SLLFSSLAWLGLSTVLPDTFLLSLTVCIIAQELSRVAYFMLLKKA 89


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,320,238
Number of Sequences: 27780
Number of extensions: 382878
Number of successful extensions: 934
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)