Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0279
(701 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ974166-1|ABJ52806.1| 494|Anopheles gambiae serpin 6 protein. 26 1.3
AF364132-2|AAL35509.1| 411|Anopheles gambiae putative odorant r... 25 3.0
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 24 4.0
AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled ... 24 4.0
AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein... 24 4.0
AJ130950-1|CAA10259.1| 114|Anopheles gambiae SG2 protein protein. 23 7.0
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 23 7.0
DQ230893-2|ABD94312.1| 525|Anopheles gambiae iduronate 2-sulfat... 23 9.3
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 23 9.3
AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ chann... 23 9.3
AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium ch... 23 9.3
>DQ974166-1|ABJ52806.1| 494|Anopheles gambiae serpin 6 protein.
Length = 494
Score = 25.8 bits (54), Expect = 1.3
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -3
Query: 138 NSSRTSRRRLQATL 97
NSSRT+ RRLQATL
Sbjct: 350 NSSRTAIRRLQATL 363
>AF364132-2|AAL35509.1| 411|Anopheles gambiae putative odorant
receptor Or3 protein.
Length = 411
Score = 24.6 bits (51), Expect = 3.0
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 447 RIRFPSKPDTPRSSEPILIPKLRIQFADFPYL 352
R+R + TP+ +++PKL+ + A P+L
Sbjct: 5 RLRLITSFGTPQDKRTMVLPKLKDETAVMPFL 36
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 24.2 bits (50), Expect = 4.0
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 399 LALRTGACRVWTGSGCGRCRVWSM 470
+++ G V G+ C C VWSM
Sbjct: 5 ISVHVGQAGVQIGNPCWDCTVWSM 28
>AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled
receptor protein.
Length = 611
Score = 24.2 bits (50), Expect = 4.0
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -2
Query: 463 QTRHRPHPLPVQTRHAPVLRANPYSEVT 380
Q H PH Q +H P + P++ V+
Sbjct: 72 QLHHSPHQYHQQVQHQPQPPSTPFANVS 99
>AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 612
Score = 24.2 bits (50), Expect = 4.0
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -2
Query: 463 QTRHRPHPLPVQTRHAPVLRANPYSEVT 380
Q H PH Q +H P + P++ V+
Sbjct: 73 QLHHSPHQYHQQVQHQPQPPSTPFANVS 100
>AJ130950-1|CAA10259.1| 114|Anopheles gambiae SG2 protein protein.
Length = 114
Score = 23.4 bits (48), Expect = 7.0
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -2
Query: 121 SAASSGHFGLPRRTLVFKDEGTIIETVPLPGSGIGTGFPF 2
S+ + F +P T F D T I +P G+G G GFPF
Sbjct: 76 SSGAFPQFSIPSWTN-FTDAFTSI--LPFFGNGQGGGFPF 112
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 23.4 bits (48), Expect = 7.0
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 687 PLNGGRTESCRSRTKRNR 634
P +GGR SCRS R R
Sbjct: 262 PRSGGRWPSCRSPPARRR 279
>DQ230893-2|ABD94312.1| 525|Anopheles gambiae iduronate 2-sulfatase
precursor protein.
Length = 525
Score = 23.0 bits (47), Expect = 9.3
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +1
Query: 226 VSGYSLRTLKFR*GMYVEMSRRFVPISAAGLQGEE 330
+ GYS+RT +FR +++ + + + + GEE
Sbjct: 455 IMGYSMRTDRFRYTAWIKFNPDYFKRDWSTIYGEE 489
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 23.0 bits (47), Expect = 9.3
Identities = 9/30 (30%), Positives = 13/30 (43%)
Frame = -3
Query: 297 YEPARHLHVHPSPEFQGPQRVSGHRRKCGA 208
++ H H + GP +S R CGA
Sbjct: 655 HQGQHHAQHHSNGTHHGPSLMSSARESCGA 684
>AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ channel
protein.
Length = 574
Score = 23.0 bits (47), Expect = 9.3
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -1
Query: 200 FRTISPFYRIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSN 81
F T+ Y N+ A + T G G FRP+ TP N
Sbjct: 213 FNTLDTVYMFR-NATAPSIFPTEVGSSSGRFRPILWTPEN 251
>AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium
channel protein.
Length = 572
Score = 23.0 bits (47), Expect = 9.3
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -1
Query: 200 FRTISPFYRIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSN 81
F T+ Y N+ A + T G G FRP+ TP N
Sbjct: 213 FNTLDTVYMFR-NATAPSIFPTEVGSSSGRFRPILWTPEN 251
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 792,509
Number of Sequences: 2352
Number of extensions: 17256
Number of successful extensions: 48
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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