Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0278
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   2.4  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   5.5  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   7.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   7.3  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 175 HNTCVYIRSVLFTLNEPVDFESIANER 255
           H  C     +   +++PV FES+ N R
Sbjct: 34  HQKCPKPAPIYSPVSKPVSFESLPNRR 60


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 105 YVPFLPILEVLSFVPITDNRSN 40
           YVP + + ++L   PI+   SN
Sbjct: 10  YVPIILLSKILGIAPISYKNSN 31


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 160 RNAFLHNTCVYIRSVLFTLNEPVDFE 237
           RNAF H+  +   SVL  +N  V ++
Sbjct: 197 RNAFRHDGLLLTMSVLPNVNSSVYYD 222


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 111 FPYVPFLPILEVLSFVPITDNRSNH 37
           +P++P      + SFVP+  N  +H
Sbjct: 176 YPFLPSDVSYNLFSFVPLVVNALDH 200


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 111 FPYVPFLPILEVLSFVPITDNRSNH 37
           +P++P      + SFVP+  N  +H
Sbjct: 132 YPFLPSDVSYNLFSFVPLVVNALDH 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,582
Number of Sequences: 336
Number of extensions: 3306
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)