Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0276
(703 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical pr... 30 1.8
AC084160-2|AAK39373.1| 376|Caenorhabditis elegans Hypothetical ... 29 2.4
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 28 5.6
AC024743-1|AAK68402.2| 177|Caenorhabditis elegans Hypothetical ... 28 5.6
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 28 7.4
U46675-6|AAB52642.1| 111|Caenorhabditis elegans Hypothetical pr... 27 9.8
>U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical
protein T10H10.3 protein.
Length = 389
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +1
Query: 67 LYANETSVSDSKLEDDLYNSILVADYDHSVEK--SKQIYE-DKKSEVITNVVNKLIRNNK 237
+YA S D LE DL+N + +Y+H + K +++++ KK E NV+N+ I
Sbjct: 318 MYAQSDSSLDHLLEWDLFNFEQLTEYEHLMMKLYKQEVFDIVKKYEKKRNVLNREIHRRD 377
Query: 238 MN 243
++
Sbjct: 378 VS 379
>Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical
protein F08G12.1 protein.
Length = 635
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +1
Query: 58 VASLYANETSVSDSKLEDDLYNSILVADYDHSVE---KSKQIYEDKKSEV 198
+ L N++ + S E D Y ADYD +E + ++ Y DKKSE+
Sbjct: 250 IRQLETNKSEIVSSYHELDCYQETPEADYDTFIELVNQKRREYADKKSEM 299
>AC084160-2|AAK39373.1| 376|Caenorhabditis elegans Hypothetical
protein Y73B3B.1 protein.
Length = 376
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 79 ETSVSDSKLEDDLYNSILVADYDHSVEKSKQIYEDKKS 192
+ ++SD K+ DL +SI DHS+ KS + EDK S
Sbjct: 276 DPAISDGKVVLDLIDSIKPNVIDHSLVKSGKSNEDKMS 313
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 7/76 (9%)
Frame = +2
Query: 29 KPFKLFCVFSW------RLCMPTKPQ-SPTPNSKTIFTTASSLPITTIPLKRANRSTRTR 187
KP+ + C F+ +C P+KP+ S T + T TT ++ P TT +T T
Sbjct: 59 KPYNIDCPFAIPPITFNAVCDPSKPKPSTTTTTTTTPTTTTTTPTTTTTTPTTTTTTPTT 118
Query: 188 RAKSSQMS*TNSYETT 235
+ + T TT
Sbjct: 119 TTTTPTTTTTTPTTTT 134
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +2
Query: 53 FSWRLC--MP--TKPQSPTPNSKTIFTTASSLPITTIPLKRANRSTRTRRAKSSQMS*TN 220
+ W+ C +P TKP + TP + T T S+ TT + T T +++ + +
Sbjct: 246 YEWKKCGLVPETTKPTTTTPTTTTTTTIPSTTSSTTSTSTTTSVVTTTTVTSTTEPTTST 305
Query: 221 SYETTR*TAWSSLPA 265
S TT T ++ P+
Sbjct: 306 STPTTTTTMQTTTPS 320
>AC024743-1|AAK68402.2| 177|Caenorhabditis elegans Hypothetical
protein Y104H12BR.1 protein.
Length = 177
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 79 ETSVSDSKLEDDLYNSILVADYDHSVEKSKQIYEDKKS 192
+ ++SD K+ DL ++I DHS+ KS + EDK S
Sbjct: 108 DPAISDGKVVLDLIDAIKPNVIDHSLVKSGKSNEDKMS 145
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 50 VFSWRLCMPTKPQSPTPNSKTIFTTASSLPITTIPLK 160
V + R +PT P+ P +T T AS L T +P+K
Sbjct: 647 VSTQRAPVPTTPRPTAPAVQTTTTRASRLETTRVPVK 683
>Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical
protein K02E2.8a protein.
Length = 188
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 68 CMPTKPQSPTPNSKTIFTTASSLPITTIPLKRANRSTRT 184
C+PT+ +P TT S P TT+P+ N + T
Sbjct: 14 CIPTQFVTPLNPGTITTTTTISAPTTTVPITTTNPVSTT 52
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 83 PQSPTPNSKTIFTTAS-SLPITTIPLKRANRSTRTR 187
PQ P P +T T +LP TT+P+ N++ RT+
Sbjct: 762 PQVPLPVVQTTQTAPKPTLPPTTLPVLTTNKTPRTK 797
>U46675-6|AAB52642.1| 111|Caenorhabditis elegans Hypothetical
protein F35A5.2 protein.
Length = 111
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 626 KYDNDVLFFMYNREYNEALVLS 691
KY+N F YNREYN+ V S
Sbjct: 29 KYNNPPFCFAYNREYNDNDVTS 50
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,187,142
Number of Sequences: 27780
Number of extensions: 277621
Number of successful extensions: 1182
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1182
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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