Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0274
         (702 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   1.7  
AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    25   2.3  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    25   3.0  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
 Frame = +2

Query: 539 PLIGSDRASSERF--QWYLVPDKNAATSEIFFYIYN 640
           PL GS    ++ F  QWYL  + N  T     Y Y+
Sbjct: 559 PLCGSASRQTQTFTSQWYLNQEDNTDTGLRILYFYD 594


>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 557 RASSERFQWYLVPDKN 604
           RA +E+F WY+ P+ N
Sbjct: 213 RALAEKFDWYVFPNAN 228


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -2

Query: 128 PDITLSYNCLLYSALIVWAKNKSAIKTSFFISLAVFI 18
           P + +S+ C+L   L   A  K  +  S  +SL VF+
Sbjct: 242 PTVLISFLCVLVFYLPAEAGEKVTLGISILLSLVVFL 278


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 716,682
Number of Sequences: 2352
Number of extensions: 14567
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)