Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0273
         (686 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g19960.1 68417.m02923 potassium transporter family protein si...    31   0.54 
At5g59730.1 68418.m07487 exocyst subunit EXO70 family protein le...    27   8.8  
At3g51520.1 68416.m05642 diacylglycerol acyltransferase family c...    27   8.8  

>At4g19960.1 68417.m02923 potassium transporter family protein
           similar to potassium transporter [Arabidopsis thaliana]
           gi|2654088|gb|AAB87687; KUP/HAK/KT Transporter family
           member, PMID:11500563; contains Pfam profile PF02705: K+
           potassium transporter
          Length = 842

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = +1

Query: 241 LYSLCRYVSKHLSVRSPTHLYIYF 312
           +Y++C+Y +  L   SPT++Y+YF
Sbjct: 277 MYNICKYDTSVLKAFSPTYIYLYF 300


>At5g59730.1 68418.m07487 exocyst subunit EXO70 family protein
           leucine zipper-containing protein, Lycopersicon
           esculentum, PIR:S21495 contains Pfam domain PF03081:
           Exo70 exocyst complex subunit;
          Length = 634

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = -1

Query: 158 VEHVQNILYLLIRNNQSCLEKTFCQNVFPHALILWISQYH 39
           V H+Q+ ++ L+  N S  +  + QN+   A+ L  S++H
Sbjct: 68  VRHLQSTMHRLVSVNPSSEKLIYAQNLMQSAMKLLESEFH 107


>At3g51520.1 68416.m05642 diacylglycerol acyltransferase family
           contains Pfam PF03982: Diacylglycerol acyltransferase
          Length = 314

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +1

Query: 172 LSVFYIGSISLYLAICFP*KKYVLYSLCRYVSKHLSVRSPTHLYI 306
           LS+  +G +SL++ I    +      L RY+ KH     P  LY+
Sbjct: 47  LSLMVLGLLSLFIFIPIDHRSKYGRKLARYICKHACNYFPVSLYV 91


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,325,459
Number of Sequences: 28952
Number of extensions: 247258
Number of successful extensions: 482
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 482
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1457719448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)