Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0272
         (698 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2SLV2 Cluster: Putative uncharacterized protein; n=1; ...    34   2.9  
UniRef50_Q9XIS3 Cluster: Lectin-like protein kinase; n=4; core e...    33   8.9  

>UniRef50_Q2SLV2 Cluster: Putative uncharacterized protein; n=1;
           Hahella chejuensis KCTC 2396|Rep: Putative
           uncharacterized protein - Hahella chejuensis (strain
           KCTC 2396)
          Length = 332

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +2

Query: 326 MPLAFFYLHYIPKHSFRKFRDFLTDSVGQSGSHG 427
           +P A   L  +PKH  R++RDFLT  + ++  HG
Sbjct: 124 IPTASTRLATLPKHRIRQYRDFLTQIISEACMHG 157


>UniRef50_Q9XIS3 Cluster: Lectin-like protein kinase; n=4; core
           eudicotyledons|Rep: Lectin-like protein kinase - Populus
           nigra (Lombardy poplar)
          Length = 676

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -1

Query: 584 DLYNLGRVVLVVLCFSR--VLLPGHSFLQPCYWCLHSENNSLQPI 456
           D+Y  G VVL V+C  R    + G  FL    W LH E   L+ +
Sbjct: 536 DVYGFGAVVLEVVCGQRPWTKIGGFQFLVDWVWSLHREERILEAV 580


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 668,812,180
Number of Sequences: 1657284
Number of extensions: 12598395
Number of successful extensions: 23570
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23569
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)