Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0272
         (698 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC014217-1|AAH14217.1|  357|Homo sapiens LCMT1 protein protein.        30   6.9  
BC001214-1|AAH01214.1|  334|Homo sapiens leucine carboxyl methyl...    30   6.9  
AL137283-1|CAB70677.1|  321|Homo sapiens hypothetical protein pr...    30   6.9  
AK223364-1|BAD97084.1|  357|Homo sapiens leucine carboxyl methyl...    30   6.9  
AF151826-1|AAD34063.1|  334|Homo sapiens CGI-68 protein protein.       30   6.9  
AF037601-1|AAF18267.1|  334|Homo sapiens leucine carboxyl methyl...    30   6.9  

>BC014217-1|AAH14217.1|  357|Homo sapiens LCMT1 protein protein.
          Length = 357

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 66  RTHKSDYIEMKYFKINTPMDVNRILFIARCKQTSSCP 176
           R    D +  KYF+++ PM V R L   +CK   S P
Sbjct: 130 RLKDEDLLPSKYFEVDFPMIVTRKLHSIKCKPPLSSP 166


>BC001214-1|AAH01214.1|  334|Homo sapiens leucine carboxyl
           methyltransferase 1 protein.
          Length = 334

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 66  RTHKSDYIEMKYFKINTPMDVNRILFIARCKQTSSCP 176
           R    D +  KYF+++ PM V R L   +CK   S P
Sbjct: 107 RLKDEDLLPSKYFEVDFPMIVTRKLHSIKCKPPLSSP 143


>AL137283-1|CAB70677.1|  321|Homo sapiens hypothetical protein
           protein.
          Length = 321

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 66  RTHKSDYIEMKYFKINTPMDVNRILFIARCKQTSSCP 176
           R    D +  KYF+++ PM V R L   +CK   S P
Sbjct: 94  RLKDEDLLPSKYFEVDFPMIVTRKLHSIKCKPPLSSP 130


>AK223364-1|BAD97084.1|  357|Homo sapiens leucine carboxyl
           methyltransferase variant protein.
          Length = 357

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 66  RTHKSDYIEMKYFKINTPMDVNRILFIARCKQTSSCP 176
           R    D +  KYF+++ PM V R L   +CK   S P
Sbjct: 130 RLKDEDLLPSKYFEVDFPMIVTRKLHSIKCKPPLSSP 166


>AF151826-1|AAD34063.1|  334|Homo sapiens CGI-68 protein protein.
          Length = 334

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 66  RTHKSDYIEMKYFKINTPMDVNRILFIARCKQTSSCP 176
           R    D +  KYF+++ PM V R L   +CK   S P
Sbjct: 107 RLKDEDLLPSKYFEVDFPMIVTRKLHSIKCKPPLSSP 143


>AF037601-1|AAF18267.1|  334|Homo sapiens leucine carboxyl
           methyltransferase protein.
          Length = 334

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 66  RTHKSDYIEMKYFKINTPMDVNRILFIARCKQTSSCP 176
           R    D +  KYF+++ PM V R L   +CK   S P
Sbjct: 107 RLKDEDLLPSKYFEVDFPMIVTRKLHSIKCKPPLSSP 143


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,027,362
Number of Sequences: 237096
Number of extensions: 1966579
Number of successful extensions: 3279
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3279
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)