Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0271
         (700 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK125693-1|BAC86247.1|  321|Homo sapiens protein ( Homo sapiens ...    31   4.0  
BC094712-1|AAH94712.1|  411|Homo sapiens AMOT protein protein.         30   9.1  
AY987378-1|AAY24451.1| 1084|Homo sapiens angiomotin p130 isoform...    30   9.1  

>AK125693-1|BAC86247.1|  321|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43705 fis, clone TESOP2001818. ).
          Length = 321

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 7   PIPEPGSGTVSIIVPSSLKTSVRRGNPKWPEDAAER 114
           P+P  G+ T   ++PS+L+ ++  G P W ED+  R
Sbjct: 228 PLPPKGTETFFCVLPSALRAALSCG-PSWGEDSGPR 262


>BC094712-1|AAH94712.1|  411|Homo sapiens AMOT protein protein.
          Length = 411

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/60 (28%), Positives = 26/60 (43%)
 Frame = -3

Query: 260 TSSXEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGL 81
           TSS     S   +++PP  R S    P +P+ G H     R ++   P+  A    H+ L
Sbjct: 171 TSSLTSGGSLPLLQSPPSTRLSPARHPLVPNQGDHSAHLPRPQQHFLPN-QAHQGDHYRL 229


>AY987378-1|AAY24451.1| 1084|Homo sapiens angiomotin p130 isoform
           protein.
          Length = 1084

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/60 (28%), Positives = 26/60 (43%)
 Frame = -3

Query: 260 TSSXEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGL 81
           TSS     S   +++PP  R S    P +P+ G H     R ++   P+  A    H+ L
Sbjct: 311 TSSLTSGGSLPLLQSPPSTRLSPARHPLVPNQGDHSAHLPRPQQHFLPN-QAHQGDHYRL 369


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,300,576
Number of Sequences: 237096
Number of extensions: 2423950
Number of successful extensions: 6989
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6988
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)