Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0269
         (328 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC072681-1|AAH72681.1|  843|Homo sapiens OTUD7B protein protein.       29   3.3  
BC020622-1|AAH20622.1|  427|Homo sapiens OTUD7B protein protein.       29   3.3  
AL590487-5|CAI12652.1|  427|Homo sapiens OTU domain containing 7...    29   3.3  
AL590487-4|CAI12651.1|  843|Homo sapiens OTU domain containing 7...    29   3.3  
AJ293573-1|CAB97494.1|  858|Homo sapiens zinc finger protein Cez...    29   3.3  

>BC072681-1|AAH72681.1|  843|Homo sapiens OTUD7B protein protein.
          Length = 843

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +1

Query: 190 GLTRFPLSLSTI*RNHSQGNGLGESAGKEDPVELDSCLLTMPD 318
           G++    S+ ++ R+H   NG G     E P+E+  C   +PD
Sbjct: 98  GISHASSSIVSLARSHVSSNG-GGGGSNEHPLEMPICAFQLPD 139


>BC020622-1|AAH20622.1|  427|Homo sapiens OTUD7B protein protein.
          Length = 427

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +1

Query: 190 GLTRFPLSLSTI*RNHSQGNGLGESAGKEDPVELDSCLLTMPD 318
           G++    S+ ++ R+H   NG G     E P+E+  C   +PD
Sbjct: 98  GISHASSSIVSLARSHVSSNG-GGGGSNEHPLEMPICAFQLPD 139


>AL590487-5|CAI12652.1|  427|Homo sapiens OTU domain containing 7B
           protein.
          Length = 427

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +1

Query: 190 GLTRFPLSLSTI*RNHSQGNGLGESAGKEDPVELDSCLLTMPD 318
           G++    S+ ++ R+H   NG G     E P+E+  C   +PD
Sbjct: 98  GISHASSSIVSLARSHVSSNG-GGGGSNEHPLEMPICAFQLPD 139


>AL590487-4|CAI12651.1|  843|Homo sapiens OTU domain containing 7B
           protein.
          Length = 843

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +1

Query: 190 GLTRFPLSLSTI*RNHSQGNGLGESAGKEDPVELDSCLLTMPD 318
           G++    S+ ++ R+H   NG G     E P+E+  C   +PD
Sbjct: 98  GISHASSSIVSLARSHVSSNG-GGGGSNEHPLEMPICAFQLPD 139


>AJ293573-1|CAB97494.1|  858|Homo sapiens zinc finger protein
           Cezanne protein.
          Length = 858

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +1

Query: 190 GLTRFPLSLSTI*RNHSQGNGLGESAGKEDPVELDSCLLTMPD 318
           G++    S+ ++ R+H   NG G     E P+E+  C   +PD
Sbjct: 113 GISHASSSIVSLARSHVSSNG-GGGGSNEHPLEMPICAFQLPD 154


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,825,271
Number of Sequences: 237096
Number of extensions: 878238
Number of successful extensions: 1591
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1591
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1685725862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)