Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0268
         (695 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1162|AAN10598.1| 2922|Drosophila melanogaster CG11321-P...    31   2.0  

>AE014134-1162|AAN10598.1| 2922|Drosophila melanogaster CG11321-PB,
            isoform B protein.
          Length = 2922

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
 Frame = -2

Query: 253  DLKYSSPSSNRPRKIFIKGTSLSSTQGKIEVNLQDIN-GICLDAVSEGNIQKDNIAIKFQ 77
            D+  S P ++ P KI  +GT+ ++ +    V   DIN  + ++ +S  N  ++  AI+  
Sbjct: 1646 DVTASDPKTSTPLKILSEGTNSNTLETMENVTSTDINDNVTIEVIS--NRSEEVPAIQDL 1703

Query: 76   GNSKELG--MKNYIVEISS 26
            G +K++     N I EI+S
Sbjct: 1704 GKTKDISEPTANPIEEITS 1722


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,095,823
Number of Sequences: 53049
Number of extensions: 704497
Number of successful extensions: 2164
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2164
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)