Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0263
(619 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC101271-1|AAI01272.1| 441|Homo sapiens TUBB8 protein protein. 31 4.3
BC101270-1|AAI01271.1| 441|Homo sapiens TUBB8 protein protein. 31 4.3
BC093754-1|AAH93754.1| 587|Homo sapiens hypothetical protein LO... 31 4.3
BC093752-1|AAH93752.1| 587|Homo sapiens hypothetical protein LO... 31 4.3
AL713922-4|CAI16221.1| 435|Homo sapiens novel protein similar t... 31 4.3
AL713922-3|CAI16220.1| 410|Homo sapiens novel protein similar t... 31 4.3
AF355127-1|AAL32434.1| 444|Homo sapiens beta-tubulin 4Q protein. 31 4.3
AF131737-1|AAD20026.1| 587|Homo sapiens Unknown protein. 31 4.3
AC079353-1|AAY24034.1| 423|Homo sapiens unknown protein. 31 4.3
U83668-1|AAB48456.1| 433|Homo sapiens beta-tubulin protein. 30 5.7
U83110-1|AAB41497.1| 434|Homo sapiens beta-tubulin protein. 30 5.7
EF179181-1|ABN05284.1| 727|Homo sapiens LIM domain binding 3 pr... 29 9.9
AF276807-1|AAQ14316.1| 330|Homo sapiens Z-band alternatively sp... 29 9.9
AB014513-1|BAA31588.1| 734|Homo sapiens KIAA0613 protein protein. 29 9.9
>BC101271-1|AAI01272.1| 441|Homo sapiens TUBB8 protein protein.
Length = 441
Score = 30.7 bits (66), Expect = 4.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 477 MRPQKLYIFNIHSRKSSYVSDWIRTRVLRPSADLP 581
MR +FNI + SSY +DW+ V D+P
Sbjct: 320 MREVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIP 354
>BC101270-1|AAI01271.1| 441|Homo sapiens TUBB8 protein protein.
Length = 441
Score = 30.7 bits (66), Expect = 4.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 477 MRPQKLYIFNIHSRKSSYVSDWIRTRVLRPSADLP 581
MR +FNI + SSY +DW+ V D+P
Sbjct: 320 MREVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIP 354
>BC093754-1|AAH93754.1| 587|Homo sapiens hypothetical protein
LOC51057 protein.
Length = 587
Score = 30.7 bits (66), Expect = 4.3
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 116 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 247
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>BC093752-1|AAH93752.1| 587|Homo sapiens hypothetical protein
LOC51057 protein.
Length = 587
Score = 30.7 bits (66), Expect = 4.3
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 116 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 247
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>AL713922-4|CAI16221.1| 435|Homo sapiens novel protein similar to
beta-tubulin 4Q (TUBB4Q)kinase) II gamma protein.
Length = 435
Score = 30.7 bits (66), Expect = 4.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 477 MRPQKLYIFNIHSRKSSYVSDWIRTRVLRPSADLP 581
MR +FNI + SSY +DW+ V D+P
Sbjct: 323 MREVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIP 357
>AL713922-3|CAI16220.1| 410|Homo sapiens novel protein similar to
beta-tubulin 4Q (TUBB4Q)kinase) II gamma protein.
Length = 410
Score = 30.7 bits (66), Expect = 4.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 477 MRPQKLYIFNIHSRKSSYVSDWIRTRVLRPSADLP 581
MR +FNI + SSY +DW+ V D+P
Sbjct: 289 MREVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIP 323
>AF355127-1|AAL32434.1| 444|Homo sapiens beta-tubulin 4Q protein.
Length = 444
Score = 30.7 bits (66), Expect = 4.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 477 MRPQKLYIFNIHSRKSSYVSDWIRTRVLRPSADLP 581
MR +FNI + SSY +DW+ V D+P
Sbjct: 323 MREVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIP 357
>AF131737-1|AAD20026.1| 587|Homo sapiens Unknown protein.
Length = 587
Score = 30.7 bits (66), Expect = 4.3
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 116 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 247
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>AC079353-1|AAY24034.1| 423|Homo sapiens unknown protein.
Length = 423
Score = 30.7 bits (66), Expect = 4.3
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +2
Query: 116 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 247
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>U83668-1|AAB48456.1| 433|Homo sapiens beta-tubulin protein.
Length = 433
Score = 30.3 bits (65), Expect = 5.7
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 477 MRPQKLYIFNIHSRKSSYVSDWIRTRVLRPSADLP 581
MR +FNI + SSY +DW+ + D+P
Sbjct: 322 MREVDEQMFNIQDKNSSYFADWLPNNIKTAVCDIP 356
>U83110-1|AAB41497.1| 434|Homo sapiens beta-tubulin protein.
Length = 434
Score = 30.3 bits (65), Expect = 5.7
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 477 MRPQKLYIFNIHSRKSSYVSDWIRTRVLRPSADLP 581
MR +FNI + SSY +DW+ + D+P
Sbjct: 323 MREVDEQMFNIQDKNSSYFADWLPNNIKTAVCDIP 357
>EF179181-1|ABN05284.1| 727|Homo sapiens LIM domain binding 3
protein.
Length = 727
Score = 29.5 bits (63), Expect = 9.9
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = -2
Query: 243 LHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGH 64
L SPE A + P + SS+ Y IG + TLR+ +++ +
Sbjct: 168 LRAKTSPE---GARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASG 224
Query: 63 FGLPRRTLVFKD 28
GLP +L KD
Sbjct: 225 VGLPGGSLPIKD 236
>AF276807-1|AAQ14316.1| 330|Homo sapiens Z-band alternatively
spliced PDZ-motif protein ZASP-4 protein.
Length = 330
Score = 29.5 bits (63), Expect = 9.9
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = -2
Query: 243 LHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGH 64
L SPE A + P + SS+ Y IG + TLR+ +++ +
Sbjct: 168 LRAKTSPE---GARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASG 224
Query: 63 FGLPRRTLVFKD 28
GLP +L KD
Sbjct: 225 VGLPGGSLPIKD 236
>AB014513-1|BAA31588.1| 734|Homo sapiens KIAA0613 protein protein.
Length = 734
Score = 29.5 bits (63), Expect = 9.9
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = -2
Query: 243 LHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGH 64
L SPE A + P + SS+ Y IG + TLR+ +++ +
Sbjct: 175 LRAKTSPE---GARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASG 231
Query: 63 FGLPRRTLVFKD 28
GLP +L KD
Sbjct: 232 VGLPGGSLPIKD 243
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,798,622
Number of Sequences: 237096
Number of extensions: 2093170
Number of successful extensions: 6126
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6126
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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