Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0263
(619 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g76965.1 68414.m08961 glycine-rich protein 29 1.9
At5g57840.1 68418.m07233 transferase family protein similar to a... 29 2.5
At2g02800.2 68415.m00225 protein kinase (APK2b) identical to pro... 29 2.5
At2g02800.1 68415.m00224 protein kinase (APK2b) identical to pro... 29 2.5
At1g07350.1 68414.m00783 transformer serine/arginine-rich ribonu... 29 2.5
At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to ... 29 3.3
At5g42370.1 68418.m05159 expressed protein 29 3.3
At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identic... 29 3.3
At4g15850.1 68417.m02410 DEAD/DEAH box helicase, putative simila... 28 4.3
At1g72520.1 68414.m08386 lipoxygenase, putative similar to lipox... 28 4.3
At3g29765.1 68416.m03762 hAT dimerisation domain-containing prot... 28 5.7
At5g22390.1 68418.m02612 expressed protein 27 7.5
At1g10930.1 68414.m01255 DNA helicase (RECQl4A) nearly identical... 27 7.5
At5g37380.2 68418.m04492 DNAJ heat shock N-terminal domain-conta... 27 10.0
At5g37380.1 68418.m04491 DNAJ heat shock N-terminal domain-conta... 27 10.0
At3g03940.1 68416.m00412 protein kinase family protein contains ... 27 10.0
At2g05210.1 68415.m00549 expressed protein 27 10.0
At2g03890.2 68415.m00352 phosphatidylinositol 3- and 4-kinase fa... 27 10.0
At2g03890.1 68415.m00351 phosphatidylinositol 3- and 4-kinase fa... 27 10.0
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 27 10.0
>At1g76965.1 68414.m08961 glycine-rich protein
Length = 158
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 422 PGTGRIRFPSKPDTPRSSEPILIPKLRIQFAD 327
PG + FP KP+ P P +P+L + F D
Sbjct: 93 PGAAIVVFPKKPEEPVKVVPTPMPQLNLFFGD 124
>At5g57840.1 68418.m07233 transferase family protein similar to
anthranilate N-hydroxycinnamoyl/benzoyltransferase from
Dianthus caryophyllus [gi:2239091]
Length = 443
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 297 EALHLGDLLRIWVRTARHLHVHPSPEFSRSAESIRTPP 184
EA LG ++ W TAR L V +P R+ R PP
Sbjct: 157 EATSLGYIMEAWSLTARGLLVKLTPFLDRTVLHARNPP 194
>At2g02800.2 68415.m00225 protein kinase (APK2b) identical to
protein kinase APK2b [Arabidopsis thaliana]
gi|2852449|dbj|BAA24695
Length = 426
Score = 29.1 bits (62), Expect = 2.5
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = -3
Query: 488 LRPHYIKILTR*NEHNARTSTRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFA-DFPYLH 312
LRP ++L + ++ ST+PGTG ++ D+PR S ++ K +++ D P LH
Sbjct: 352 LRPKMSEVLAKLDQLE---STKPGTGVGNRQAQIDSPRGSNGSIVQKSPRRYSYDRPLLH 408
>At2g02800.1 68415.m00224 protein kinase (APK2b) identical to
protein kinase APK2b [Arabidopsis thaliana]
gi|2852449|dbj|BAA24695
Length = 426
Score = 29.1 bits (62), Expect = 2.5
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = -3
Query: 488 LRPHYIKILTR*NEHNARTSTRPGTGRIRFPSKPDTPRSSEPILIPKLRIQFA-DFPYLH 312
LRP ++L + ++ ST+PGTG ++ D+PR S ++ K +++ D P LH
Sbjct: 352 LRPKMSEVLAKLDQLE---STKPGTGVGNRQAQIDSPRGSNGSIVQKSPRRYSYDRPLLH 408
>At1g07350.1 68414.m00783 transformer serine/arginine-rich
ribonucleoprotein, putative similar to GB:Y09506 from
[Nicotiana tabacum] (Plant Mol. Biol. 35 (3), 261-269
(1997))
Length = 382
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -2
Query: 261 VRTARHLHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHG 127
+RTAR H PS RS R+ + S R Y PS G G
Sbjct: 167 LRTARGRHKSPSYSPRRSVSCSRSRSRSYSSDRGRSYSPSYGRRG 211
>At5g45900.1 68418.m05645 autophagy 7 (APG7) nearly identical to
autophagy 7 [Arabidopsis thaliana] GI:19912147; contains
Pfam profile PF00899: ThiF family
Length = 697
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -3
Query: 209 PQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRR 75
P ++G CG +V NH++LL +S+ L+ ++S +R +
Sbjct: 42 PISITGFYGPCGHPQVSNHLTLLSESLPLDEQSLIASTSHGNRNK 86
>At5g42370.1 68418.m05159 expressed protein
Length = 447
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -1
Query: 148 PFYRIPWNSNAQAEKKTLPGPLGGVFRPL-WVTPSNTR 38
P Y + + Q+ +K +P PL + R L W TPS R
Sbjct: 285 PLYDVTSSGLVQSVEKVVPRPLRSIVRLLFWYTPSTMR 322
>At3g13320.1 68416.m01677 calcium exchanger (CAX2) almost identical
to low affinity calcium antiporter CAX2 (GI:1488267)
[Arabidopsis thaliana]; Ca2+:Cation Antiporter (CaCA)
Family member PMID:11500563
Length = 441
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +2
Query: 11 SIIVPSSLKTSVRRGNPKWPEDAAERSGKSFLFC--LSVRVPWNPI 142
S++ SL TS + PK P+++ S K +FC L++ +P+ P+
Sbjct: 41 SLMEQGSLSTSFPQHTPKAPKNSVLNSIKIVIFCNKLNLLLPFGPL 86
>At4g15850.1 68417.m02410 DEAD/DEAH box helicase, putative similar
to D-E-A-D box protein [Drosophila melanogaster]
GI:499204; contains Pfam profiles PF00270: DEAD/DEAH box
helicase, PF00271: Helicase conserved C-terminal domain
Length = 512
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 207 RTLKIQVRDVRGDVAPFVPISAAGLQGEEPLVDRIM*VREVGKLD 341
R L +QV+DV +AP V +S G+ + I + + KLD
Sbjct: 104 RDLALQVKDVFDAIAPAVGLSVGSAVGQSSIAGEISQLIKTPKLD 148
>At1g72520.1 68414.m08386 lipoxygenase, putative similar to
lipoxygenase gi:1495804 [Solanum tuberosum], gi:1654140
[Lycopersicon esculentum], GB:CAB56692 [Arabidopsis
thaliana]
Length = 926
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -2
Query: 204 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQK 106
+S + P R ++PYLPS G RTLR+K
Sbjct: 215 QSQKDHPSKRILFTNQPYLPSETPSGLRTLREK 247
>At3g29765.1 68416.m03762 hAT dimerisation domain-containing protein
Length = 536
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 288 HLGDLLRIWVRTARHLHVHP 229
HLGDL R+ V T +HL HP
Sbjct: 441 HLGDLARVMVETRKHLS-HP 459
>At5g22390.1 68418.m02612 expressed protein
Length = 202
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 83 ERSGKSFLFCLSVRVPWNPIEG 148
+ S KSFL LS PWNP +G
Sbjct: 17 DNSPKSFLDTLSSSSPWNPSKG 38
>At1g10930.1 68414.m01255 DNA helicase (RECQl4A) nearly identical to
DNA Helicase [Arabidopsis thaliana] GI:11121449
Length = 1188
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 246 HLHVHPSPEFSRSAESIRTPPQMRCSSRSE 157
H H +P+ S S S+RTPP R +SR E
Sbjct: 229 HYHSTSTPQPSVSNFSLRTPPVDRSASRLE 258
>At5g37380.2 68418.m04492 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -2
Query: 462 NSLKRT*RTNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDP 337
N K T TN T R +P P Q + P + NP ++ T+P
Sbjct: 150 NFAKTTFTTNARTTTPRNNP-PAQKTNPPAQKTNPPAQKTNP 190
>At5g37380.1 68418.m04491 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -2
Query: 462 NSLKRT*RTNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDP 337
N K T TN T R +P P Q + P + NP ++ T+P
Sbjct: 150 NFAKTTFTTNARTTTPRNNP-PAQKTNPPAQKTNPPAQKTNP 190
>At3g03940.1 68416.m00412 protein kinase family protein contains
Pfam domains, PF00069: Protein kinase domain
Length = 701
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 273 LRIWVRTARHLHVHPSPEFSRSAESIRTPPQ 181
LR R +R L P+P AE+I PPQ
Sbjct: 4 LRSGARRSRRLDEQPNPPLVEQAENIVLPPQ 34
>At2g05210.1 68415.m00549 expressed protein
Length = 364
Score = 27.1 bits (57), Expect = 10.0
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -2
Query: 204 ESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPR 49
+S T C+ +E Y +GF T TLR+KR L S +F PR
Sbjct: 282 DSTATLEAFLCNKDAE-YFWGLGFQDTETLRKKRNWL--LGIRESSNFVAPR 330
>At2g03890.2 68415.m00352 phosphatidylinositol 3- and 4-kinase
family protein low similarity to phosphatidylinositol
4-kinase type-II beta [Homo sapiens] GI:20159767;
contains Pfam profile PF00454: Phosphatidylinositol 3-
and 4-kinase
Length = 530
Score = 27.1 bits (57), Expect = 10.0
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -3
Query: 131 MELERSGRKENSSRTSRRRLQATLGYPVEHSFLKTRERLL 12
MEL+RS ++ T +RRLQ L +P E S L + +L
Sbjct: 60 MELDRS----DNVHTVKRRLQIALNFPTEESSLTYGDMVL 95
>At2g03890.1 68415.m00351 phosphatidylinositol 3- and 4-kinase
family protein low similarity to phosphatidylinositol
4-kinase type-II beta [Homo sapiens] GI:20159767;
contains Pfam profile PF00454: Phosphatidylinositol 3-
and 4-kinase
Length = 650
Score = 27.1 bits (57), Expect = 10.0
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -3
Query: 131 MELERSGRKENSSRTSRRRLQATLGYPVEHSFLKTRERLL 12
MEL+RS ++ T +RRLQ L +P E S L + +L
Sbjct: 60 MELDRS----DNVHTVKRRLQIALNFPTEESSLTYGDMVL 95
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 498 IFNIHSRKSSYVSDWIRTRVLRPSADLP 581
I NI ++ SSY +WI V D+P
Sbjct: 331 ILNIQNKNSSYFVEWIPNNVKSSVCDIP 358
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,207,961
Number of Sequences: 28952
Number of extensions: 307981
Number of successful extensions: 923
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1246162608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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