Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0262
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    32   0.004
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       23   3.1  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   5.4  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   5.4  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   5.4  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   7.1  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   9.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.4  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 32.3 bits (70), Expect = 0.004
 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
 Frame = +2

Query: 5   YLHSLSIVHRDIKPENLLVEVGSDGSIRGLKLADFGLAVEVWRPLHAVCGT-----PT-Y 166
           +L    +VHRD+   N+LV          +K++DFGL+ +V++  +  C       P  +
Sbjct: 607 HLAKTRVVHRDLAARNVLVCENHT-----VKVSDFGLSRDVYQD-NVYCKNGGGKLPVRW 660

Query: 167 VAPEILLETGYGLKIDVWAAGVILY 241
           +A E L    Y    DVW+ GV+L+
Sbjct: 661 MALESLTHQRYTTYSDVWSFGVLLW 685


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -3

Query: 332 GNSSRAERIASNNFSWSPSGDEKG 261
           GN+  +E+   N   W  SG+  G
Sbjct: 101 GNNLHSEKAKFNESKWQDSGESPG 124


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 259 PPFSSPDGDQEKLFDAI 309
           PP    D  +EKL+DAI
Sbjct: 328 PPCGQLDPTKEKLYDAI 344


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 574 SHVSLSTPRLYEASDDKRQHR 636
           S   +  PR Y ASD + +HR
Sbjct: 173 SRTPIEIPRDYTASDLEEEHR 193


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -1

Query: 376 RGRWPRPTRAPSAARGTPV 320
           R  W RP   PSA    PV
Sbjct: 409 RPEWARPPSTPSADGSKPV 427


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 518 PPRVWPFVLTARHRAP 565
           PP V PF+    HR P
Sbjct: 201 PPLVSPFLAAMAHRPP 216


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +1

Query: 160 YLCCSGDSPR 189
           Y+C +GD+PR
Sbjct: 196 YVCINGDTPR 205


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/46 (21%), Positives = 21/46 (45%)
 Frame = -1

Query: 211 DLQSISSFEENLRSNISRSATDGMKWSPNFNCETEVSQFQAADTSI 74
           D   +  F   LR + + S  +G+K +  F C   +  + A  +++
Sbjct: 16  DKHMVHWFRRGLRLHDNPSLREGLKGARTFRCVFVLDPWFAGSSNV 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,840
Number of Sequences: 336
Number of extensions: 3448
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)