Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0256
         (467 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC117306-1|AAI17307.1|  698|Homo sapiens WD repeat domain 65 pro...    29   8.0  
BC117280-1|AAI17281.1|  698|Homo sapiens WD repeat domain 65 pro...    29   8.0  
AL139138-2|CAI18963.1|  698|Homo sapiens WD repeat domain 65 pro...    29   8.0  
AK056562-1|BAB71217.1|  698|Homo sapiens protein ( Homo sapiens ...    29   8.0  

>BC117306-1|AAI17307.1|  698|Homo sapiens WD repeat domain 65
           protein.
          Length = 698

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +3

Query: 30  YFI*YCKNVSFSEQSHFYAYIEKKTIHFETTPFKQNITFL 149
           Y +  C   SFS   H +A +    IH  TT   +NI+ L
Sbjct: 469 YSVRGCGECSFSNGGHLFAAVNGNVIHVYTTTSLENISSL 508


>BC117280-1|AAI17281.1|  698|Homo sapiens WD repeat domain 65
           protein.
          Length = 698

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +3

Query: 30  YFI*YCKNVSFSEQSHFYAYIEKKTIHFETTPFKQNITFL 149
           Y +  C   SFS   H +A +    IH  TT   +NI+ L
Sbjct: 469 YSVRGCGECSFSNGGHLFAAVNGNVIHVYTTTSLENISSL 508


>AL139138-2|CAI18963.1|  698|Homo sapiens WD repeat domain 65
           protein.
          Length = 698

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +3

Query: 30  YFI*YCKNVSFSEQSHFYAYIEKKTIHFETTPFKQNITFL 149
           Y +  C   SFS   H +A +    IH  TT   +NI+ L
Sbjct: 469 YSVRGCGECSFSNGGHLFAAVNGNVIHVYTTTSLENISSL 508


>AK056562-1|BAB71217.1|  698|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32000 fis, clone NT2RP7009370, weakly similar to
           PUTATIVE SERINE/THREONINE-PROTEIN KINASE PKWA (EC
           2.7.1.-). ).
          Length = 698

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +3

Query: 30  YFI*YCKNVSFSEQSHFYAYIEKKTIHFETTPFKQNITFL 149
           Y +  C   SFS   H +A +    IH  TT   +NI+ L
Sbjct: 469 YSVRGCGECSFSNGGHLFAAVNGNVIHVYTTTSLENISSL 508


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,616,988
Number of Sequences: 237096
Number of extensions: 1336393
Number of successful extensions: 2738
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2738
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4042952858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)