Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0252
(750 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0693 - 22207582-22207620,22208421-22208597,22209258-222093... 38 0.006
04_04_0258 + 23988409-23989580,23990450-23990851,23991138-23991204 35 0.079
01_05_0174 + 18919759-18920265,18920381-18920443,18921060-189217... 32 0.42
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 31 0.74
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 31 0.98
07_03_0536 - 19205515-19205686,19205807-19205931,19206428-192065... 31 1.3
01_07_0303 + 42615578-42615709,42616273-42616312,42616393-426164... 31 1.3
10_08_0425 - 17806117-17806401,17806862-17806984,17807076-178072... 30 2.3
10_08_0225 - 15995436-15995555,15995655-15995735,15995813-159959... 30 2.3
08_01_0397 - 3509186-3510291,3510322-3512335 29 3.0
07_01_0893 + 7484598-7484744,7484837-7484902,7494387-7494530,749... 29 3.0
02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530 29 3.0
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 29 3.9
06_01_0226 - 1730931-1731527,1732290-1732469 29 3.9
03_01_0226 + 1795120-1795686,1796040-1796171 29 5.2
12_02_0842 - 23588826-23589198,23589548-23590203 28 6.9
08_02_0692 + 20080929-20081484,20081932-20081998,20082141-200824... 28 6.9
05_01_0538 + 4646772-4647059,4647462-4647542,4647819-4647890,464... 28 6.9
03_03_0246 + 15789635-15794227,15794314-15794555,15794630-157947... 28 6.9
12_02_0800 + 23299674-23299678,23299714-23299791,23299876-232999... 28 9.1
04_04_1677 + 35306232-35306328,35306697-35307248,35307324-353076... 28 9.1
04_04_0596 - 26497863-26497913,26498010-26498081,26499015-264990... 28 9.1
>12_02_0693 -
22207582-22207620,22208421-22208597,22209258-22209347,
22210215-22210280,22210473-22210570,22210669-22210789,
22210875-22212477,22213332-22213915
Length = 925
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/68 (27%), Positives = 36/68 (52%)
Frame = -3
Query: 724 RQTRDREIRSRREPKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKY 545
R R+RE+R R E +R+ L+E +E +KQ+ R +A ++ ++ + + +K
Sbjct: 527 RLEREREMRQREEKEREQRRLEEERELEKQRERERAARQAVERATKEARERAAAEARAKA 586
Query: 544 ERRVDTRS 521
ER R+
Sbjct: 587 EREARQRA 594
>04_04_0258 + 23988409-23989580,23990450-23990851,23991138-23991204
Length = 546
Score = 34.7 bits (76), Expect = 0.079
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = -2
Query: 743 RNSGSASSNSRPRNTISKRAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAPAQN 564
RN S +RPR + E GL ++ + + + T +S + SRP SAH P
Sbjct: 282 RNRPSPFGAARPREEV---LAEKGLDWRKMETEIEQKTSRPTSSQSSRPNSAHSSRPGSP 338
Query: 563 SSSV 552
S V
Sbjct: 339 GSQV 342
>01_05_0174 +
18919759-18920265,18920381-18920443,18921060-18921761,
18922934-18923068,18923391-18923474,18924095-18924151,
18924290-18924376,18924963-18925205
Length = 625
Score = 32.3 bits (70), Expect = 0.42
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = -3
Query: 721 QTRDREIRSRREPKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYE 542
QTR R R R+PKR + +E +E ++++ + + ++ + EA+ P KI K +
Sbjct: 94 QTRRRRRRRGRKPKRPAEESEEDEEEEEEEAKAEEAREEENTEAVPIGEPVKITGRGKKQ 153
Query: 541 RR 536
R+
Sbjct: 154 RK 155
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 31.5 bits (68), Expect = 0.74
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 6/55 (10%)
Frame = -3
Query: 724 RQTRDREIRSRREP----KRQDYDLK--ELKERQKQQLRHKALKKGLDPEALTGK 578
R+ R+ E R R+E K+++ + K E K R+K++ + K LKK + + LTGK
Sbjct: 441 RKKREEEERLRKEEEERLKKEEEERKAEEAKRRKKEREKEKLLKKKQEGKLLTGK 495
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 31.1 bits (67), Expect = 0.98
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = -3
Query: 721 QTRDREIRSRREPKRQDYDL-KELKERQKQQLRHKALKKGLDPEALTGK 578
+ R R+ R + +D + +E+K +QK++ + K +KK D + LTGK
Sbjct: 195 ELRKRKAEEERLQREEDERMVEEMKMQQKERDKGKTMKKRQDGKTLTGK 243
>07_03_0536 -
19205515-19205686,19205807-19205931,19206428-19206554,
19206653-19206777,19207616-19207708,19207779-19208052,
19208138-19208269,19208391-19208470,19209049-19209117,
19209227-19209343,19209416-19209484,19209839-19209892,
19210012-19210049,19211243-19211354,19211497-19211619,
19211728-19211755,19212048-19212104,19212984-19213028,
19213340-19213361,19213817-19213844,19214338-19214418
Length = 656
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 719 NSRPRNTISKRAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAH-RQAPAQNSSSV 552
N+R R+ ISK KE+ A A +E ++G +PR H Q+ Q S SV
Sbjct: 487 NARERHVISKHEKESHEPRISAVNSHDAPSENADMEKGRKPRQIHDGQSAPQASGSV 543
>01_07_0303 +
42615578-42615709,42616273-42616312,42616393-42616477,
42616634-42616813,42618274-42618354,42618890-42619011,
42619867-42620723,42621656-42621897,42622107-42622200,
42622306-42622476,42622695-42622740,42624101-42624111,
42624141-42624392
Length = 770
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -3
Query: 727 HRQTRDREIRSRREPKRQDYDLKELKERQKQQ 632
HR T D + ++ E KR+D + K ++ER+K +
Sbjct: 138 HRATLDEDWKTPEEVKREDLEKKNVRERRKTE 169
>10_08_0425 - 17806117-17806401,17806862-17806984,17807076-17807222,
17807307-17807450,17808557-17808668,17808762-17808898,
17809016-17809156,17810921-17811004,17811275-17811742,
17811858-17811936,17812494-17812506,17813884-17814460,
17814502-17814774,17814899-17815045,17815354-17815413,
17816124-17816510
Length = 1058
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/55 (30%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Frame = -3
Query: 715 RDREIRSRREPKRQDYDLKELKERQKQQL-RHKALKKGL--DPEALTGKHPPKIQ 560
R+RE+R R+E + Q+ + +LK R+K+ + ++AL + DP+A + P+++
Sbjct: 880 REREMRKRKEREEQEMERVKLKIRRKEAVSSYQALLVEIIKDPKASWTESKPRLE 934
>10_08_0225 -
15995436-15995555,15995655-15995735,15995813-15995956,
15996305-15996386,15996479-15996561,15996655-15996759,
15996869-15996907,15997004-15997060,15997701-15997769,
15997959-15998069,15998382-15998564
Length = 357
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/61 (22%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = -2
Query: 746 PRNSGSASSNSRPRNTISKRAKETGLRLKRAQRKTKAATEAQ-SSQEGSRPRSAHRQAPA 570
P S ++SN+ ++K K+ ++++ + E+ +S EGSRP+ H+ + +
Sbjct: 297 PYESAKSTSNNDEIADMAKSLKKKAKEFRKSEAQENVRLESYVASNEGSRPKKKHKSSKS 356
Query: 569 Q 567
+
Sbjct: 357 K 357
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = -3
Query: 724 RQTRDREIRSRRE---PKRQDYDLKELKERQKQQLRHKALKKGLDPEA-LTGKHPPKIQV 557
R+ RDRE RSRR + ++ D+ ++R+++ H + +PE +G ++
Sbjct: 91 REERDREERSRRREAAAEEEEEDVDRDRKRRRRSSHHHHHHRDAEPEGPASGAREEEVVD 150
Query: 556 ASKYERRVDTRSYDDK 509
+ ERR + +++
Sbjct: 151 VEEAERRRQKKKEEEQ 166
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/73 (21%), Positives = 35/73 (47%)
Frame = -3
Query: 727 HRQTRDREIRSRREPKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASK 548
H + RDRE S R R+D D ++R +++ RH+ ++ + + + + +
Sbjct: 28 HHRDRDRERSSSRHHHREDRDDDRDRDRDRER-RHREKERDREERKAREREEREKEKERE 86
Query: 547 YERRVDTRSYDDK 509
RR + R +++
Sbjct: 87 RARRREERDREER 99
>07_01_0893 +
7484598-7484744,7484837-7484902,7494387-7494530,
7494860-7495235,7495904-7496017,7496282-7496454,
7496562-7496669,7497311-7497377,7497791-7497904,
7498121-7498257,7498727-7498813,7498962-7498986,
7499044-7499266,7499770-7499947,7500039-7500152,
7500249-7500380,7500488-7500588,7500720-7500933
Length = 839
Score = 29.5 bits (63), Expect = 3.0
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 12/107 (11%)
Frame = -2
Query: 746 PRNSGSASSNSRPRNTISKRAKETGLRLKRAQRKTKAATEAQSSQEGSRPRS--AHRQAP 573
P + + NS+ + KET K+A K ++ ++ SR R+ H +P
Sbjct: 256 PPSKQTEQENSKSNSNKDNACKETQYADKKASSKDFVCSQQSNNSVASRTRAKILHSASP 315
Query: 572 ---------AQNSSSVQVREACRHTILRRQKKL-FEGDLEKLNKDFL 462
+NSS ++R+A R L+ + + + D E+ NKD L
Sbjct: 316 LSVVSISPSKKNSSDQKIRKAVRKQPLKATQPISTQPDKEESNKDGL 362
>02_04_0463 + 23135732-23136888,23138956-23139333,23139506-23139530
Length = 519
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = -2
Query: 743 RNSGSASSNSRPRNTISKRAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAPAQN 564
R+ S +RPR I E GL ++ + + T +S + SRP SAH P
Sbjct: 277 RSRPSPFGAARPREDI---LAEKGLDWRKMETEIDHKTSRPTSSQSSRPGSAHSSLPGSP 333
Query: 563 SS 558
S
Sbjct: 334 GS 335
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = -3
Query: 700 RSRREPKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRS 521
++R+ KRQ D L +++++ K +KG P + PPK + A++ + R
Sbjct: 87 KARKHKKRQLEDTYNLIVKKRKEYEEKMKEKGEQPIMFSHLGPPKRRPAAEEDDRAKNPK 146
Query: 520 YDD 512
+D
Sbjct: 147 PED 149
>06_01_0226 - 1730931-1731527,1732290-1732469
Length = 258
Score = 29.1 bits (62), Expect = 3.9
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Frame = -2
Query: 746 PRNSGSASSNSRPRNTISKRAKETGLR---LKRAQRKTKAATEAQSSQE-GSRPRSAHRQ 579
P +A+S RP + ++ LR + RA + AA EA+ + G+RP + +
Sbjct: 142 PEPEDAAASGRRPSSPAPEQEPAGQLRGSDVLRALERAAAAKEAKRRKRAGARPAARRQD 201
Query: 578 APAQNSSSVQVREACRHTILRRQKKLFEGDLEKLNKDFLEK 456
A + + A R +RR+ +LE K ++K
Sbjct: 202 AGERRGGELAAAGAARPIEIRREWATRIRELELRVKQLVDK 242
>03_01_0226 + 1795120-1795686,1796040-1796171
Length = 232
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/75 (26%), Positives = 32/75 (42%)
Frame = -3
Query: 748 GPGTLGVHRQTRDREIRSRREPKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPP 569
GP + R+ D E R+ +R + + L E ++QQL A + + G P
Sbjct: 43 GPKSRSARRREEDAEKRAEAAARRAEN--RRLAELEQQQLAAAARRPDRKAARVGGPVVP 100
Query: 568 KIQVASKYERRVDTR 524
K+ A RR + R
Sbjct: 101 KVTEAELLRRREEER 115
>12_02_0842 - 23588826-23589198,23589548-23590203
Length = 342
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -3
Query: 712 DREIRSRREPKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPP 569
+ E R + R+D + KE K ++ +H L K LD A + PP
Sbjct: 280 EAEYREKMAGLRRDAEAKEQKMAEQWAAKHARLAKFLDQVAACRRWPP 327
>08_02_0692 +
20080929-20081484,20081932-20081998,20082141-20082474,
20082835-20083068,20083158-20083319
Length = 450
Score = 28.3 bits (60), Expect = 6.9
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Frame = -2
Query: 665 LKRAQRKTKA--ATEAQSSQEGS-RPRSAHRQAPAQNSSSVQVREACR----HTILRRQK 507
L ++QRK A E +++ + S RP++AH A Q + + +CR + RRQ+
Sbjct: 118 LMKSQRKISKLQAFEIETADDSSIRPKAAHELATRQVGGPLNLSYSCRDRQNYLQSRRQR 177
Query: 506 KLFEGDLEKLNKDFLEKVWQERAEQ 432
+L G + K+ E ++ E+
Sbjct: 178 ELAFGQVGMKGKEDDEGEEEDEGEE 202
>05_01_0538 +
4646772-4647059,4647462-4647542,4647819-4647890,
4648458-4649321
Length = 434
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = -3
Query: 724 RQTRDREIRSRREPKRQDYDLKELKERQKQQLRHK 620
R +RDR+ RSR +RQD + ++R ++ RH+
Sbjct: 318 RDSRDRDYRSRHSSERQD----DRRDRDREGSRHR 348
>03_03_0246 +
15789635-15794227,15794314-15794555,15794630-15794771,
15796089-15796272,15796349-15796696,15796753-15797450,
15798208-15798900
Length = 2299
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = -2
Query: 695 SKRAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAP-AQNSSSVQVRE 540
+KRA+E R+ R + K KAA E + +EG+R + +A A+ + +R+
Sbjct: 538 AKRAEEQ--RIAREEEKRKAAIEEERRKEGARKKLQELEARIARRQAESNIRD 588
>12_02_0800 +
23299674-23299678,23299714-23299791,23299876-23299920,
23300052-23300415,23300493-23300574,23300793-23300873,
23300974-23302106,23302202-23302350,23302426-23302516,
23303628-23305940
Length = 1446
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 640 KQQLRHKALKKGLDPEALTGKHPP 569
K+ RH KK +D +T KHPP
Sbjct: 882 KKSARHSRNKKKVDEAPVTSKHPP 905
>04_04_1677 +
35306232-35306328,35306697-35307248,35307324-35307608,
35308035-35308296,35308378-35308430,35308520-35308587,
35310331-35310420,35310502-35310586,35310822-35311254,
35312872-35313439,35313527-35314000
Length = 988
Score = 27.9 bits (59), Expect = 9.1
Identities = 25/95 (26%), Positives = 35/95 (36%), Gaps = 2/95 (2%)
Frame = -1
Query: 705 KYDLEESQRDRXXXXXXXXXXXXXXXXXKLSRRVSTPKRSQAST--RPKFK*RPSTRGVS 532
K LE QR + S S+P RS S RP + + +R
Sbjct: 654 KKKLEREQRSKQIKKKKTRKMHAKTDSEVTSLAPSSPPRSPTSRGGRPVYYVQSPSR--D 711
Query: 531 THDPTTTKETVRG*PRETEQGLPREGVAREGRTVR 427
+HD T +V P + G PR V R+ + R
Sbjct: 712 SHDGEKTATSVHSTPALSPMGSPRHSVGRDSSSSR 746
>04_04_0596 -
26497863-26497913,26498010-26498081,26499015-26499093,
26499440-26499553,26499822-26499871,26500353-26500398,
26501100-26501719
Length = 343
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = -3
Query: 724 RQTRDREIRSRREPKRQDYDLKELKERQKQQLRHKALKK 608
R+ ++RE RR +R+D + ++ KE+++++ R K KK
Sbjct: 138 RRRKEREEEERRR-RRKDKERRKRKEKERERERKKKEKK 175
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,215,620
Number of Sequences: 37544
Number of extensions: 204014
Number of successful extensions: 930
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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