Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0251
         (695 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110500-9|CAE54920.1|  586|Caenorhabditis elegans Hypothetical ...   161   6e-40
AL110500-8|CAB60430.1|  551|Caenorhabditis elegans Hypothetical ...   161   6e-40
U41105-5|AAA82398.1|  390|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z81455-6|CAN86597.1|  695|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z81455-5|CAJ90505.1|  611|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z81455-4|CAJ76928.1|  680|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z81455-2|CAD54123.1|  745|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z81455-1|CAB03807.2|  792|Caenorhabditis elegans Hypothetical pr...    27   9.7  
Z77658-12|CAE17787.2|  103|Caenorhabditis elegans Hypothetical p...    27   9.7  
Z77658-6|CAB01155.1|  103|Caenorhabditis elegans Hypothetical pr...    27   9.7  
U10402-5|AAA19066.2|  650|Caenorhabditis elegans Tryptophanyl (w...    27   9.7  
AL032637-27|CAN86620.1|  695|Caenorhabditis elegans Hypothetical...    27   9.7  
AL032637-26|CAJ90512.1|  611|Caenorhabditis elegans Hypothetical...    27   9.7  
AL032637-25|CAJ76956.1|  680|Caenorhabditis elegans Hypothetical...    27   9.7  
AL032637-24|CAD54171.1|  745|Caenorhabditis elegans Hypothetical...    27   9.7  
AL032637-23|CAA21625.2|  792|Caenorhabditis elegans Hypothetical...    27   9.7  
AL032637-1|CAD54169.1|  555|Caenorhabditis elegans Hypothetical ...    27   9.7  
AF016446-9|AAC24169.2|  340|Caenorhabditis elegans Hypothetical ...    27   9.7  

>AL110500-9|CAE54920.1|  586|Caenorhabditis elegans Hypothetical
           protein Y87G2A.8b protein.
          Length = 586

 Score =  161 bits (390), Expect = 6e-40
 Identities = 82/135 (60%), Positives = 102/135 (75%), Gaps = 2/135 (1%)
 Frame = -2

Query: 652 YQLIHQGTRLIP--WISSLQPKLTIQFRMVFTTRSSS*FLGSNRSPDEGQTADEAKAELE 479
           YQLIHQGTRLIP  +I+ ++    I+  +      ++ FL    +  +G+TA  A+AEL+
Sbjct: 425 YQLIHQGTRLIPADFIAPVKTLNPIRGGLHHQILLAN-FLAQTEALMKGKTAAVAEAELK 483

Query: 478 KSGMAPEAIDKILPHKVFKGNRPTNSIVLKKITPFTLGALIAMYEHKIFTQGVIWDINSY 299
            SGM+PE+I KILPHKVF+GN+PT SIVL  +TPFTLGALIA YEHKIF QG+IWDI SY
Sbjct: 484 SSGMSPESIAKILPHKVFEGNKPTTSIVLPVVTPFTLGALIAFYEHKIFVQGIIWDICSY 543

Query: 298 DQWGVELGKQLAKAM 254
           DQWGVELGKQLAK +
Sbjct: 544 DQWGVELGKQLAKVI 558



 Score = 39.5 bits (88), Expect = 0.002
 Identities = 17/27 (62%), Positives = 19/27 (70%)
 Frame = -1

Query: 254 EPELQGTAAVTGHDASTNGLINFLKKN 174
           +PEL     VT HDASTNGLI F+K N
Sbjct: 559 QPELASADTVTSHDASTNGLIAFIKNN 585



 Score = 37.1 bits (82), Expect = 0.012
 Identities = 26/60 (43%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = -3

Query: 684 GEPGTNGQHASTSSYTREPD*FHGFHRSSPNSQSNFE-WCSPQDPLANFLAQTEALMKGK 508
           GEPGTNGQHA      +          +   + +        Q  LANFLAQTEALMKGK
Sbjct: 414 GEPGTNGQHAFYQLIHQGTRLIPADFIAPVKTLNPIRGGLHHQILLANFLAQTEALMKGK 473


>AL110500-8|CAB60430.1|  551|Caenorhabditis elegans Hypothetical
           protein Y87G2A.8a protein.
          Length = 551

 Score =  161 bits (390), Expect = 6e-40
 Identities = 82/135 (60%), Positives = 102/135 (75%), Gaps = 2/135 (1%)
 Frame = -2

Query: 652 YQLIHQGTRLIP--WISSLQPKLTIQFRMVFTTRSSS*FLGSNRSPDEGQTADEAKAELE 479
           YQLIHQGTRLIP  +I+ ++    I+  +      ++ FL    +  +G+TA  A+AEL+
Sbjct: 390 YQLIHQGTRLIPADFIAPVKTLNPIRGGLHHQILLAN-FLAQTEALMKGKTAAVAEAELK 448

Query: 478 KSGMAPEAIDKILPHKVFKGNRPTNSIVLKKITPFTLGALIAMYEHKIFTQGVIWDINSY 299
            SGM+PE+I KILPHKVF+GN+PT SIVL  +TPFTLGALIA YEHKIF QG+IWDI SY
Sbjct: 449 SSGMSPESIAKILPHKVFEGNKPTTSIVLPVVTPFTLGALIAFYEHKIFVQGIIWDICSY 508

Query: 298 DQWGVELGKQLAKAM 254
           DQWGVELGKQLAK +
Sbjct: 509 DQWGVELGKQLAKVI 523



 Score = 39.5 bits (88), Expect = 0.002
 Identities = 17/27 (62%), Positives = 19/27 (70%)
 Frame = -1

Query: 254 EPELQGTAAVTGHDASTNGLINFLKKN 174
           +PEL     VT HDASTNGLI F+K N
Sbjct: 524 QPELASADTVTSHDASTNGLIAFIKNN 550



 Score = 37.1 bits (82), Expect = 0.012
 Identities = 26/60 (43%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = -3

Query: 684 GEPGTNGQHASTSSYTREPD*FHGFHRSSPNSQSNFE-WCSPQDPLANFLAQTEALMKGK 508
           GEPGTNGQHA      +          +   + +        Q  LANFLAQTEALMKGK
Sbjct: 379 GEPGTNGQHAFYQLIHQGTRLIPADFIAPVKTLNPIRGGLHHQILLANFLAQTEALMKGK 438


>U41105-5|AAA82398.1|  390|Caenorhabditis elegans Hypothetical
           protein T02G5.7 protein.
          Length = 390

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = -2

Query: 496 AKAELEKSGMAPEAIDKILPHKVFK---GNRPTNSIVLKKITPFTLGAL 359
           AKA +E+SG+APE I++++   V     G   T  I L    P T  A+
Sbjct: 36  AKAAIERSGVAPEKIEEVIGGCVLPAGLGQNVTRQISLSAGLPVTTQAV 84


>Z81455-6|CAN86597.1|  695|Caenorhabditis elegans Hypothetical
           protein B0399.1f protein.
          Length = 695

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +3

Query: 381 VIFFRTIEFVGRFPLNTLCGRILSIASGAIPDFSSSAL 494
           ++ F +I +    P NT CGR LSI +G +    SSAL
Sbjct: 405 MVTFMSIGYGDIVP-NTYCGRCLSITTGIVGAGVSSAL 441


>Z81455-5|CAJ90505.1|  611|Caenorhabditis elegans Hypothetical
           protein B0399.1e protein.
          Length = 611

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +3

Query: 381 VIFFRTIEFVGRFPLNTLCGRILSIASGAIPDFSSSAL 494
           ++ F +I +    P NT CGR LSI +G +    SSAL
Sbjct: 321 MVTFMSIGYGDIVP-NTYCGRCLSITTGIVGAGVSSAL 357


>Z81455-4|CAJ76928.1|  680|Caenorhabditis elegans Hypothetical
           protein B0399.1d protein.
          Length = 680

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +3

Query: 381 VIFFRTIEFVGRFPLNTLCGRILSIASGAIPDFSSSAL 494
           ++ F +I +    P NT CGR LSI +G +    SSAL
Sbjct: 390 MVTFMSIGYGDIVP-NTYCGRCLSITTGIVGAGVSSAL 426


>Z81455-2|CAD54123.1|  745|Caenorhabditis elegans Hypothetical
           protein B0399.1b protein.
          Length = 745

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +3

Query: 381 VIFFRTIEFVGRFPLNTLCGRILSIASGAIPDFSSSAL 494
           ++ F +I +    P NT CGR LSI +G +    SSAL
Sbjct: 455 MVTFMSIGYGDIVP-NTYCGRCLSITTGIVGAGVSSAL 491


>Z81455-1|CAB03807.2|  792|Caenorhabditis elegans Hypothetical
           protein B0399.1a protein.
          Length = 792

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +3

Query: 381 VIFFRTIEFVGRFPLNTLCGRILSIASGAIPDFSSSAL 494
           ++ F +I +    P NT CGR LSI +G +    SSAL
Sbjct: 502 MVTFMSIGYGDIVP-NTYCGRCLSITTGIVGAGVSSAL 538


>Z77658-12|CAE17787.2|  103|Caenorhabditis elegans Hypothetical
           protein F14D7.10 protein.
          Length = 103

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/46 (34%), Positives = 28/46 (60%)
 Frame = -2

Query: 580 FRMVFTTRSSS*FLGSNRSPDEGQTADEAKAELEKSGMAPEAIDKI 443
           FR+ FT   +   + +  +P E  T ++A+AEL+ +GM+  +ID I
Sbjct: 2   FRL-FTITFALLAISALSAPVEYPTEEQARAELKAAGMSQPSIDGI 46


>Z77658-6|CAB01155.1|  103|Caenorhabditis elegans Hypothetical
           protein F14D7.7 protein.
          Length = 103

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/46 (34%), Positives = 28/46 (60%)
 Frame = -2

Query: 580 FRMVFTTRSSS*FLGSNRSPDEGQTADEAKAELEKSGMAPEAIDKI 443
           FR+ FT   +   + +  +P E  T ++A+AEL+ +GM+  +ID I
Sbjct: 2   FRL-FTITFALLAISALSAPVEYPTEEQARAELKAAGMSQPSIDGI 46


>U10402-5|AAA19066.2|  650|Caenorhabditis elegans Tryptophanyl (w)
           trna synthetaseprotein 2, isoform a protein.
          Length = 650

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 480 SSSALASSAVCPSSGLRFEPRN 545
           +SSA  SSA CP   L F+PR+
Sbjct: 286 TSSASTSSARCPQCRLEFQPRD 307


>AL032637-27|CAN86620.1|  695|Caenorhabditis elegans Hypothetical
           protein B0399.1f protein.
          Length = 695

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +3

Query: 381 VIFFRTIEFVGRFPLNTLCGRILSIASGAIPDFSSSAL 494
           ++ F +I +    P NT CGR LSI +G +    SSAL
Sbjct: 405 MVTFMSIGYGDIVP-NTYCGRCLSITTGIVGAGVSSAL 441


>AL032637-26|CAJ90512.1|  611|Caenorhabditis elegans Hypothetical
           protein B0399.1e protein.
          Length = 611

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +3

Query: 381 VIFFRTIEFVGRFPLNTLCGRILSIASGAIPDFSSSAL 494
           ++ F +I +    P NT CGR LSI +G +    SSAL
Sbjct: 321 MVTFMSIGYGDIVP-NTYCGRCLSITTGIVGAGVSSAL 357


>AL032637-25|CAJ76956.1|  680|Caenorhabditis elegans Hypothetical
           protein B0399.1d protein.
          Length = 680

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +3

Query: 381 VIFFRTIEFVGRFPLNTLCGRILSIASGAIPDFSSSAL 494
           ++ F +I +    P NT CGR LSI +G +    SSAL
Sbjct: 390 MVTFMSIGYGDIVP-NTYCGRCLSITTGIVGAGVSSAL 426


>AL032637-24|CAD54171.1|  745|Caenorhabditis elegans Hypothetical
           protein B0399.1b protein.
          Length = 745

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +3

Query: 381 VIFFRTIEFVGRFPLNTLCGRILSIASGAIPDFSSSAL 494
           ++ F +I +    P NT CGR LSI +G +    SSAL
Sbjct: 455 MVTFMSIGYGDIVP-NTYCGRCLSITTGIVGAGVSSAL 491


>AL032637-23|CAA21625.2|  792|Caenorhabditis elegans Hypothetical
           protein B0399.1a protein.
          Length = 792

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +3

Query: 381 VIFFRTIEFVGRFPLNTLCGRILSIASGAIPDFSSSAL 494
           ++ F +I +    P NT CGR LSI +G +    SSAL
Sbjct: 502 MVTFMSIGYGDIVP-NTYCGRCLSITTGIVGAGVSSAL 538


>AL032637-1|CAD54169.1|  555|Caenorhabditis elegans Hypothetical
           protein B0399.1c protein.
          Length = 555

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +3

Query: 381 VIFFRTIEFVGRFPLNTLCGRILSIASGAIPDFSSSAL 494
           ++ F +I +    P NT CGR LSI +G +    SSAL
Sbjct: 265 MVTFMSIGYGDIVP-NTYCGRCLSITTGIVGAGVSSAL 301


>AF016446-9|AAC24169.2|  340|Caenorhabditis elegans Hypothetical
           protein C02E7.10 protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 424 KGNRPTNSIVLKKITPFTLGALIAMYEHK 338
           KG++P   ++L+K+ P+        YEHK
Sbjct: 259 KGSQPNLDLILEKLIPYLFPDACMEYEHK 287


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,755,346
Number of Sequences: 27780
Number of extensions: 360600
Number of successful extensions: 1024
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)