Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0248
         (418 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6R9I6 Cluster: Putative uncharacterized protein orf126...    35   0.78 
UniRef50_Q8IEL1 Cluster: Putative uncharacterized protein PF13_0...    32   4.1  
UniRef50_Q7RQV9 Cluster: Fulmal1; n=7; Plasmodium (Vinckeia)|Rep...    32   4.1  
UniRef50_UPI0000E4665D Cluster: PREDICTED: hypothetical protein;...    32   5.5  
UniRef50_A7LQN3 Cluster: Putative uncharacterized protein; n=1; ...    32   5.5  
UniRef50_Q7QP15 Cluster: GLP_83_9814_6782; n=1; Giardia lamblia ...    31   7.2  
UniRef50_Q59VG4 Cluster: Potential butanediol dehydrogenase; n=7...    31   7.2  
UniRef50_A3I8N3 Cluster: Putative uncharacterized protein; n=1; ...    31   9.6  

>UniRef50_Q6R9I6 Cluster: Putative uncharacterized protein
           orf126-b2; n=1; Zea mays|Rep: Putative uncharacterized
           protein orf126-b2 - Zea mays (Maize)
          Length = 126

 Score = 34.7 bits (76), Expect = 0.78
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +1

Query: 136 VWNYYII*IYTLLQWNKDYFRNTFVWLSSA 225
           +W  YI  ++TLLQW+ D  ++TF++L  A
Sbjct: 85  IWYVYINLLFTLLQWDSDMIQSTFLYLLMA 114


>UniRef50_Q8IEL1 Cluster: Putative uncharacterized protein
           PF13_0056; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PF13_0056 - Plasmodium
           falciparum (isolate 3D7)
          Length = 1135

 Score = 32.3 bits (70), Expect = 4.1
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +1

Query: 43  YVSHEL*SALIKIYPLYINKYIMKN 117
           YVSH   + LI+IY  YINKY++ N
Sbjct: 651 YVSHFKDNFLIRIYDTYINKYLINN 675


>UniRef50_Q7RQV9 Cluster: Fulmal1; n=7; Plasmodium (Vinckeia)|Rep:
           Fulmal1 - Plasmodium yoelii yoelii
          Length = 935

 Score = 32.3 bits (70), Expect = 4.1
 Identities = 16/56 (28%), Positives = 34/56 (60%)
 Frame = +1

Query: 64  SALIKIYPLYINKYIMKNILSHDFVWNYYII*IYTLLQWNKDYFRNTFVWLSSALL 231
           + +IK++  +IN YI +  ++H  + N Y+I +Y   +  K+Y  +T+  LS+ ++
Sbjct: 692 NTMIKLF--FINNYIFRLFINHS-IHNKYVIVVYKERKKEKEYKYSTYYKLSTLII 744


>UniRef50_UPI0000E4665D Cluster: PREDICTED: hypothetical protein;
           n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 1276

 Score = 31.9 bits (69), Expect = 5.5
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = +2

Query: 155 YKYIPCCNGIKTTFEIPLSGYLLRCCTGRNTM*HRSVSI 271
           Y  + C NG+ +T ++  S YL+  CTG N   + ++S+
Sbjct: 8   YYEVSCSNGVASTDKVYASEYLIASCTGLNPGGNYTISV 46


>UniRef50_A7LQN3 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides ovatus ATCC 8483|Rep: Putative
           uncharacterized protein - Bacteroides ovatus ATCC 8483
          Length = 460

 Score = 31.9 bits (69), Expect = 5.5
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +1

Query: 64  SALIKIYPLYINKYIMKNILSHDFVWNYYII*IYTLLQWNKD 189
           S L  I P+   KY     LS+   W  + I IY+ LQWNKD
Sbjct: 361 SQLGYIVPIGEQKYQTTVYLSNTHEWESFEIEIYSDLQWNKD 402


>UniRef50_Q7QP15 Cluster: GLP_83_9814_6782; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_83_9814_6782 - Giardia lamblia ATCC
           50803
          Length = 1010

 Score = 31.5 bits (68), Expect = 7.2
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = -1

Query: 208 QRYFESSLYSIAARYIFILCNNST 137
           Q  F+ S+YSI  +Y+ +LCNNST
Sbjct: 524 QSCFQGSIYSIV-KYVILLCNNST 546


>UniRef50_Q59VG4 Cluster: Potential butanediol dehydrogenase; n=7;
           Saccharomycetales|Rep: Potential butanediol
           dehydrogenase - Candida albicans (Yeast)
          Length = 394

 Score = 31.5 bits (68), Expect = 7.2
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +2

Query: 155 YKYIPCCNGIKTTFEIPLSGYLLR-CCTGRNTM*HRSVSIFKYDLLCGRK 301
           Y+Y   C+G+K TFE  L    +R C T      H+S+ ++  ++    K
Sbjct: 265 YEYSYDCSGVKATFETGLKTLKIRGCATNVAIWAHKSIPLYPMEITLSEK 314


>UniRef50_A3I8N3 Cluster: Putative uncharacterized protein; n=1;
           Bacillus sp. B14905|Rep: Putative uncharacterized
           protein - Bacillus sp. B14905
          Length = 248

 Score = 31.1 bits (67), Expect = 9.6
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = -1

Query: 268 GD*PMLHCVTPRTAAQKITRQRYFESSLYSIAARYIFILCNNST 137
           G+   + C TP   A K+ R R+F + L +I  R+IF   N+ST
Sbjct: 148 GEPYFISCATP---AHKLRRSRHFSTLLMAIQPRWIFEEINDST 188


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 360,225,940
Number of Sequences: 1657284
Number of extensions: 6419246
Number of successful extensions: 13902
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13900
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19465676618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)