Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0246
(658 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 143 4e-33
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 140 3e-32
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 134 1e-30
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 134 2e-30
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 134 2e-30
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 133 4e-30
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 129 5e-29
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 128 2e-28
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 127 2e-28
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 125 1e-27
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 123 3e-27
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 122 6e-27
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 121 1e-26
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 118 1e-25
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 111 2e-23
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 107 2e-22
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 107 2e-22
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 105 9e-22
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 105 9e-22
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 104 2e-21
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 103 3e-21
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 102 9e-21
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 100 4e-20
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 97 3e-19
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 96 6e-19
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 95 1e-18
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 95 1e-18
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 93 7e-18
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 92 9e-18
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 91 2e-17
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 88 2e-16
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 86 8e-16
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 82 1e-14
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 80 4e-14
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 80 4e-14
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 79 7e-14
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 79 1e-13
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 79 1e-13
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 78 2e-13
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 78 2e-13
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 78 2e-13
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 78 2e-13
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 77 4e-13
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 77 5e-13
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 75 2e-12
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 75 2e-12
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 75 2e-12
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 75 2e-12
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 75 2e-12
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 74 3e-12
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 74 3e-12
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 73 5e-12
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 73 6e-12
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 73 6e-12
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 73 8e-12
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 72 1e-11
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 72 1e-11
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 71 2e-11
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 69 8e-11
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 68 2e-10
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 68 2e-10
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 67 3e-10
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 67 3e-10
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 67 4e-10
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 67 4e-10
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 66 7e-10
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 66 7e-10
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 66 9e-10
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 66 9e-10
UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46; N... 65 1e-09
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 63 5e-09
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 63 7e-09
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 61 2e-08
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 61 3e-08
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 60 3e-08
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 60 3e-08
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 60 5e-08
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 60 5e-08
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 59 8e-08
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 59 1e-07
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 58 1e-07
UniRef50_O03826 Cluster: Cytochrome oxidase subunit I; n=21; Pro... 57 3e-07
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 56 6e-07
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 54 2e-06
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 53 5e-06
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 52 1e-05
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 51 2e-05
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 51 3e-05
UniRef50_A1INK5 Cluster: Cytochrome c oxidase subunit I; n=71; P... 51 3e-05
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 50 5e-05
UniRef50_Q5VIA7 Cluster: Cytochrome oxidase subunit I; n=1; Psyc... 50 5e-05
UniRef50_Q5W4C3 Cluster: Cytochrome oxidase subunit I; n=79; Pte... 47 3e-04
UniRef50_Q35528 Cluster: Cytochrome oxidase subunit I; n=39; Aph... 45 0.001
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 44 0.002
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 44 0.003
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 43 0.007
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 42 0.017
UniRef50_Q6Y3P5 Cluster: Cytochrome oxidase subunit I; n=4; Tali... 41 0.023
UniRef50_Q1XAB3 Cluster: Cytochrome oxidase subunit I; n=14; Neo... 41 0.030
UniRef50_Q8WFY0 Cluster: Cytochrome oxidase subunit I; n=5; Euma... 40 0.040
UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit... 40 0.069
UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18; ... 38 0.21
UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase, sub... 38 0.21
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 38 0.28
UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3; Py... 38 0.28
UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1; Ca... 38 0.28
UniRef50_Q8HN76 Cluster: Cytochrome c oxidase subunit I; n=21; A... 37 0.37
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 37 0.37
UniRef50_Q9EMW4 Cluster: AMV085; n=1; Amsacta moorei entomopoxvi... 36 0.65
UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol oxid... 36 0.65
UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1; Rhod... 36 1.1
UniRef50_Q94ZM7 Cluster: COI protein; n=2; Sessilia|Rep: COI pro... 36 1.1
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 35 2.0
UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum l... 35 2.0
UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8; Ba... 34 2.6
UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 34 2.6
UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal ... 34 3.5
UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1; Ja... 33 6.0
UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxida... 33 6.0
UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 33 8.0
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 143 bits (346), Expect = 4e-33
Identities = 68/84 (80%), Positives = 74/84 (88%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 180
VG+D+DTRAYFTSAT+IIAVPTGIK+ LAT HGTQI Y+P L LGFVFLFTVGGLT
Sbjct: 208 VGMDVDTRAYFTSATMIIAVPTGIKVFSWLATFHGTQILYSPVTLWTLGFVFLFTVGGLT 267
Query: 181 GVILANSSIDITLHDTYYVVAHFH 252
GV+LANSSIDI LHDTYYVVAHFH
Sbjct: 268 GVVLANSSIDIVLHDTYYVVAHFH 291
Score = 50.8 bits (116), Expect = 3e-05
Identities = 20/30 (66%), Positives = 27/30 (90%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFF 395
+PLFTG++LN++ LKIQF +FIGVN+TFF
Sbjct: 310 FPLFTGVTLNNFFLKIQFIIMFIGVNLTFF 339
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 140 bits (339), Expect = 3e-32
Identities = 65/82 (79%), Positives = 74/82 (90%)
Frame = +1
Query: 7 IDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 186
+ + TRAYFTSAT+IIAVPTGIKI LAT+HGTQINY+P++L LGFVFLFTVGGLTGV
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSPSLLWALGFVFLFTVGGLTGV 60
Query: 187 ILANSSIDITLHDTYYVVAHFH 252
+LANSS+DI LHDTYYVVAHFH
Sbjct: 61 VLANSSLDIVLHDTYYVVAHFH 82
Score = 56.0 bits (129), Expect = 7e-07
Identities = 32/67 (47%), Positives = 39/67 (58%)
Frame = +2
Query: 275 ICNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRL 454
IC Y IY L+ FI K L KNSIF NI+ K+NIF TF S + ST+ LS L
Sbjct: 91 ICYYVSIYPLMPFINWVINKPLMIKNSIFNNIFSCKFNIFPPTFLSISRDASTMLWLSWL 150
Query: 455 IYFMKYN 475
I +KY+
Sbjct: 151 ILLLKYH 157
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 134 bits (325), Expect = 1e-30
Identities = 58/84 (69%), Positives = 74/84 (88%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 180
VG+D+DTRAYFTSAT+IIA+PTG+K+ LAT+HG+ + ++ +L LGF+FLFTVGGLT
Sbjct: 295 VGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLFTVGGLT 354
Query: 181 GVILANSSIDITLHDTYYVVAHFH 252
G++LANSS+DI LHDTYYVVAHFH
Sbjct: 355 GIVLANSSLDIVLHDTYYVVAHFH 378
Score = 64.9 bits (151), Expect = 2e-09
Identities = 27/43 (62%), Positives = 35/43 (81%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+PLF+G +L+ KI F +FIGVN+TFFPQHFLGL+G+PRR
Sbjct: 397 FPLFSGYTLDQTYAKIHFTIMFIGVNLTFFPQHFLGLSGMPRR 439
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 134 bits (324), Expect = 2e-30
Identities = 60/84 (71%), Positives = 73/84 (86%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 180
VG+D+DTRAYFTSAT+IIA+PTG+K+ LAT+HG I ++ +L LGF+FLFTVGGLT
Sbjct: 60 VGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPMLWALGFIFLFTVGGLT 119
Query: 181 GVILANSSIDITLHDTYYVVAHFH 252
G+ILANSS+DI LHDTYYVVAHFH
Sbjct: 120 GIILANSSLDIVLHDTYYVVAHFH 143
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 134 bits (323), Expect = 2e-30
Identities = 60/84 (71%), Positives = 72/84 (85%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 180
VG+D+DTRAYFTSAT+IIA+PTG+K+ LAT+HG I + +L LGF+FLFTVGGLT
Sbjct: 295 VGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTVGGLT 354
Query: 181 GVILANSSIDITLHDTYYVVAHFH 252
G++LANSSIDI LHDTYYVVAHFH
Sbjct: 355 GIVLANSSIDIVLHDTYYVVAHFH 378
Score = 66.9 bits (156), Expect = 4e-10
Identities = 29/43 (67%), Positives = 35/43 (81%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+PLFTG +L+ KI F +FIGVN+TFFPQHFLGLAG+PRR
Sbjct: 397 FPLFTGYTLHDTWTKIHFGVMFIGVNLTFFPQHFLGLAGMPRR 439
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 133 bits (321), Expect = 4e-30
Identities = 59/84 (70%), Positives = 72/84 (85%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 180
VG+D+DTRAYFTSAT+IIA+PTG+K+ LAT+HG I + +L LGF+FLFTVGGLT
Sbjct: 295 VGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTVGGLT 354
Query: 181 GVILANSSIDITLHDTYYVVAHFH 252
G++LANSS+DI LHDTYYVVAHFH
Sbjct: 355 GIVLANSSLDIVLHDTYYVVAHFH 378
Score = 70.9 bits (166), Expect = 2e-11
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+PLFTG +LNS KI F +FIGVN+TFFPQHFLGLAG+PRR
Sbjct: 397 FPLFTGYTLNSVWTKIHFGVMFIGVNLTFFPQHFLGLAGMPRR 439
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 129 bits (312), Expect = 5e-29
Identities = 57/84 (67%), Positives = 73/84 (86%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 180
VG+D+DTRAYFT+AT+IIAVPTGIKI LAT +G +++ P++L LGFVF+FT+GGL+
Sbjct: 295 VGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSLHFIPSLLFALGFVFMFTIGGLS 354
Query: 181 GVILANSSIDITLHDTYYVVAHFH 252
GV+LAN+S+DI HDTYYVVAHFH
Sbjct: 355 GVVLANASLDIAFHDTYYVVAHFH 378
Score = 56.0 bits (129), Expect = 7e-07
Identities = 24/42 (57%), Positives = 28/42 (66%)
Frame = +3
Query: 309 PLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
P GL N K F+ +F GVN+TFFPQHFLGL G+PRR
Sbjct: 398 PKILGLDYNLLYSKAHFWVLFTGVNLTFFPQHFLGLQGMPRR 439
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 128 bits (308), Expect = 2e-28
Identities = 56/84 (66%), Positives = 71/84 (84%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 180
VG+D+DTRAYFT+AT+IIAVPTGIK+ +AT+ G+ + + + LGFVFLFT+GGLT
Sbjct: 272 VGMDVDTRAYFTAATMIIAVPTGIKVFSWMATLQGSNLQWETPLFWALGFVFLFTLGGLT 331
Query: 181 GVILANSSIDITLHDTYYVVAHFH 252
G++LANSSID+ LHDTYYVVAHFH
Sbjct: 332 GIVLANSSIDVVLHDTYYVVAHFH 355
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 127 bits (307), Expect = 2e-28
Identities = 57/84 (67%), Positives = 70/84 (83%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 180
VG+D+DTRAYFT+AT+IIAVPTGIKI +AT+ G I Y +L +GF+FLFT+GGLT
Sbjct: 297 VGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLT 356
Query: 181 GVILANSSIDITLHDTYYVVAHFH 252
G++LANS +DI LHDTYYVVAHFH
Sbjct: 357 GIVLANSGLDIALHDTYYVVAHFH 380
Score = 48.8 bits (111), Expect = 1e-04
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = +3
Query: 348 KIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+I F+ F GVN+TFFP HFLGL+G+PRR
Sbjct: 413 QIHFWITFFGVNLTFFPMHFLGLSGMPRR 441
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 125 bits (301), Expect = 1e-27
Identities = 56/84 (66%), Positives = 70/84 (83%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 180
+G+D+DTRAYFTSAT+IIA+PTGIKI +AT G ++ N IL +GF+FLFTVGGLT
Sbjct: 279 IGMDVDTRAYFTSATMIIAIPTGIKIFSWMATFSGVKLMNNLMILWTMGFIFLFTVGGLT 338
Query: 181 GVILANSSIDITLHDTYYVVAHFH 252
GV+L+NSS+D+ LHDTYY VAHFH
Sbjct: 339 GVVLSNSSVDVVLHDTYYGVAHFH 362
Score = 70.1 bits (164), Expect = 4e-11
Identities = 28/43 (65%), Positives = 35/43 (81%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+P+F GL +N Y LKI F+ FIGVN+ FFPQHFLGL+G+PRR
Sbjct: 381 FPMFFGLMMNEYFLKIHFYLTFIGVNLIFFPQHFLGLSGMPRR 423
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 123 bits (297), Expect = 3e-27
Identities = 56/84 (66%), Positives = 70/84 (83%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 180
VG+D+DTRAYFT+AT+IIAVPTGIKI +ATI I+ +L +GF+FLFT+GGLT
Sbjct: 302 VGLDVDTRAYFTAATMIIAVPTGIKIFSWIATIWEGSIHLKTPMLFAIGFIFLFTIGGLT 361
Query: 181 GVILANSSIDITLHDTYYVVAHFH 252
G++LANS +DI+LHDTYYVVAHFH
Sbjct: 362 GIVLANSGLDISLHDTYYVVAHFH 385
Score = 53.2 bits (122), Expect = 5e-06
Identities = 23/39 (58%), Positives = 29/39 (74%)
Frame = +3
Query: 318 TGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
TGL + +I F++ FIGVN+TF P HFLGLAG+PRR
Sbjct: 408 TGLQYPETLGQIHFWSTFIGVNLTFMPMHFLGLAGMPRR 446
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 122 bits (295), Expect = 6e-27
Identities = 57/84 (67%), Positives = 68/84 (80%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 180
VG+ + RAYFTSAT+IIA+PTGIK LAT G I ++P +L LGF+FLFTVGGLT
Sbjct: 296 VGMXVXPRAYFTSATMIIAIPTGIKAFSWLATXXGGTIKWDPPMLWALGFIFLFTVGGLT 355
Query: 181 GVILANSSIDITLHDTYYVVAHFH 252
G++LANSS+DI LHDTYYVVAHFH
Sbjct: 356 GIVLANSSLDIALHDTYYVVAHFH 379
Score = 65.3 bits (152), Expect = 1e-09
Identities = 28/43 (65%), Positives = 34/43 (79%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+PLFTG +LN+ K F +F GVN+TFFPQHFLGLAG+PRR
Sbjct: 398 FPLFTGYTLNNAWAKAHFGVMFTGVNLTFFPQHFLGLAGMPRR 440
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 121 bits (292), Expect = 1e-26
Identities = 57/86 (66%), Positives = 71/86 (82%), Gaps = 2/86 (2%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQIN--YNPNIL*RLGFVFLFTVGG 174
VG+D+DTRAYFT+AT+IIAVPTGIKI LAT+ G+ N + + LGF+FLFT+GG
Sbjct: 260 VGMDVDTRAYFTAATMIIAVPTGIKIFSWLATVSGSGRNLIFTTPMAWALGFIFLFTIGG 319
Query: 175 LTGVILANSSIDITLHDTYYVVAHFH 252
LTG++L+NSS+DI LHDTYYVVAHFH
Sbjct: 320 LTGIVLSNSSLDILLHDTYYVVAHFH 345
Score = 55.2 bits (127), Expect = 1e-06
Identities = 24/39 (61%), Positives = 29/39 (74%)
Frame = +3
Query: 318 TGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
TG + I F+ +F+GVNITFFPQHFLGLAG+PRR
Sbjct: 368 TGYAYKDIYGLIHFWLMFLGVNITFFPQHFLGLAGLPRR 406
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 118 bits (284), Expect = 1e-25
Identities = 52/84 (61%), Positives = 69/84 (82%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 180
VG+D+DTRAYFT+AT+IIA+PTG+KI LAT +G +++ +L LGFV +FT+GGL+
Sbjct: 321 VGLDVDTRAYFTAATLIIAIPTGVKIFSWLATCYGGSLHFTTPMLFALGFVVMFTIGGLS 380
Query: 181 GVILANSSIDITLHDTYYVVAHFH 252
GV+LAN+S +I HDTYYVVAHFH
Sbjct: 381 GVVLANASENIAFHDTYYVVAHFH 404
Score = 60.1 bits (139), Expect = 5e-08
Identities = 26/42 (61%), Positives = 32/42 (76%)
Frame = +3
Query: 309 PLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
P GLS ++ KI F+ +FIGVN+TFFPQHFLGL G+PRR
Sbjct: 424 PKIIGLSYDTKASKIHFWILFIGVNLTFFPQHFLGLQGMPRR 465
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 111 bits (266), Expect = 2e-23
Identities = 49/83 (59%), Positives = 65/83 (78%)
Frame = +1
Query: 4 GIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 183
G+ ++ + YFT+AT++IAVPTGIKI +ATI G I++ ++ LGF+FLFTVGG+TG
Sbjct: 338 GMSVNVKMYFTAATMVIAVPTGIKIFSWIATIWGGSISFKTPMVWALGFIFLFTVGGVTG 397
Query: 184 VILANSSIDITLHDTYYVVAHFH 252
V+LAN +D LHDTYYVVAHFH
Sbjct: 398 VVLANGGVDDVLHDTYYVVAHFH 420
Score = 53.2 bits (122), Expect = 5e-06
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+P +G N ++ ++ F+ F GVN+ FFP HFLGL+G+PRR
Sbjct: 439 FPKMSGKMYNEFLGQLHFWVFFAGVNLLFFPMHFLGLSGMPRR 481
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 107 bits (257), Expect = 2e-22
Identities = 73/158 (46%), Positives = 87/158 (55%), Gaps = 4/158 (2%)
Frame = +1
Query: 10 DIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 189
D+DTRAYFTSAT+IIAVPTGIKI LAT+HGTQINY P++L LGFVFLFTVGG
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYTPSLLWALGFVFLFTVGGPN--- 57
Query: 190 LANSSIDITLH--DTYYV--VAHFH*FXXXXXXXXXXXXXXXXXXXXXAFH*ILIY*KFN 357
+N S+ I + Y++ + F F F + KFN
Sbjct: 58 WSNFSLFINWYCSSRYHIMLLLIFIMFFQLGLYLLLYQDSFIDTHYLQDFLLMQNDLKFN 117
Query: 358 FLQYLLE*I*HFFHNIF*V*LEYLDDIQIIQTHIFHEI 471
Y LE I HF HNIF EYLDDIQI + E+
Sbjct: 118 LQLYFLELILHFSHNIFLDLPEYLDDIQIFLMDLIVEM 155
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 107 bits (257), Expect = 2e-22
Identities = 51/86 (59%), Positives = 66/86 (76%), Gaps = 3/86 (3%)
Frame = +1
Query: 4 GIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINY---NPNIL*RLGFVFLFTVGG 174
G+DIDTRAYFT+AT++IAVPTG+K+ LATI G + +P+ +G V LFT+GG
Sbjct: 299 GLDIDTRAYFTAATLMIAVPTGVKVFNWLATIFGGVYSLKHSHPSTFWAIGVVLLFTIGG 358
Query: 175 LTGVILANSSIDITLHDTYYVVAHFH 252
LTGVILAN+++ LHD+YYVVAHFH
Sbjct: 359 LTGVILANAALSTLLHDSYYVVAHFH 384
Score = 50.4 bits (115), Expect = 4e-05
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+P +TG+ ++ F FIGVN TFFP H++GL G+PRR
Sbjct: 403 FPFWTGMVPRKDLVLTHFMLTFIGVNFTFFPMHWMGLTGMPRR 445
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 105 bits (252), Expect = 9e-22
Identities = 47/81 (58%), Positives = 64/81 (79%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 180
VG+D D+RAYF+ A++IIA+PTG KI LATI+G + + +L +GF+ LFT+GG+T
Sbjct: 312 VGLDADSRAYFSGASLIIAIPTGSKIFSWLATIYGGTLRWTTPLLYAVGFIVLFTIGGVT 371
Query: 181 GVILANSSIDITLHDTYYVVA 243
GV++ANSS+DI HDTYYVVA
Sbjct: 372 GVVIANSSLDIMFHDTYYVVA 392
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 105 bits (252), Expect = 9e-22
Identities = 49/78 (62%), Positives = 62/78 (79%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 180
VG+D+DTRAYFT+AT+IIAVPTGIKI LAT++G + +L LGF+ LFT+GGLT
Sbjct: 294 VGLDVDTRAYFTAATMIIAVPTGIKIFSWLATLYGGSLRITTPMLFALGFIALFTIGGLT 353
Query: 181 GVILANSSIDITLHDTYY 234
GVILAN+S+D+ LHD Y
Sbjct: 354 GVILANASLDVALHDLKY 371
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 104 bits (250), Expect = 2e-21
Identities = 56/95 (58%), Positives = 67/95 (70%), Gaps = 14/95 (14%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL- 177
VG+D+DTRAYFT+AT+IIAVPTGIKI LAT +G I P +L LGFVFLFT+GGL
Sbjct: 354 VGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIKMTPVMLFSLGFVFLFTIGGLL 413
Query: 178 -------------TGVILANSSIDITLHDTYYVVA 243
+GV+LAN+S+DI HDTYYVVA
Sbjct: 414 NHLLWKINKFRFVSGVVLANASLDIAFHDTYYVVA 448
Score = 57.2 bits (132), Expect = 3e-07
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +3
Query: 309 PLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
P G + + + K+QF+ +FIGVN TFFPQHFLGL G+PRR
Sbjct: 505 PKMLGFNYDLNLAKMQFWLLFIGVNATFFPQHFLGLQGMPRR 546
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 103 bits (248), Expect = 3e-21
Identities = 47/83 (56%), Positives = 61/83 (73%)
Frame = +1
Query: 4 GIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 183
G+DIDTR YF++AT+IIA+P+ +KI L T G+ P F+FLFTVGGL+G
Sbjct: 306 GLDIDTRTYFSAATMIIAIPSAVKIFNWLGTFFGSNQKMQPLWCWTYSFIFLFTVGGLSG 365
Query: 184 VILANSSIDITLHDTYYVVAHFH 252
+IL+ +S+DI LHDTYYVVAHFH
Sbjct: 366 IILSAASLDIILHDTYYVVAHFH 388
Score = 49.2 bits (112), Expect = 9e-05
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +3
Query: 309 PLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
P G+S +S ++ F F+G N+TFFP HF GL G+PR+
Sbjct: 408 PYMYGISFDSVMMMAVFVCFFVGTNMTFFPMHFAGLQGMPRK 449
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 102 bits (244), Expect = 9e-21
Identities = 47/84 (55%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
Frame = +1
Query: 4 GIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQI-NYNPNIL*RLGFVFLFTVGGLT 180
GID T+AYFT+AT++IA+PTGIK+ +AT+ G I Y P GFV LFT+GG+T
Sbjct: 299 GIDTSTKAYFTAATMVIAIPTGIKVFNWIATMWGGSIWMYTPMYF-AAGFVVLFTIGGIT 357
Query: 181 GVILANSSIDITLHDTYYVVAHFH 252
G+IL+N+ ID ++HDT+YVV HFH
Sbjct: 358 GIILSNAGIDTSIHDTHYVVGHFH 381
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = +3
Query: 318 TGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
TGLS + + + F+ FIGVN TFFP HFLG G+PRR
Sbjct: 404 TGLSYSESLGQAHFWMTFIGVNFTFFPMHFLGSGGMPRR 442
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 100 bits (239), Expect = 4e-20
Identities = 47/75 (62%), Positives = 59/75 (78%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 180
VG+D DTRAYFTSAT+IIA+PTGIKI LATI+G I ++ + F+FLFTVGGLT
Sbjct: 295 VGLDADTRAYFTSATMIIAIPTGIKIFSWLATIYGGSIRLAVPMMFAIAFLFLFTVGGLT 354
Query: 181 GVILANSSIDITLHD 225
GV+LAN+S+D+ HD
Sbjct: 355 GVVLANASLDVAFHD 369
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 97.1 bits (231), Expect = 3e-19
Identities = 44/84 (52%), Positives = 61/84 (72%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 180
VG+ + +AYF AT++IAVPTGIKI +AT+ I++ ++ LGF+FLFT+GG T
Sbjct: 400 VGMTLTQQAYFMVATMVIAVPTGIKIFSWIATMWMGSISFKTPMMFALGFIFLFTLGGTT 459
Query: 181 GVILANSSIDITLHDTYYVVAHFH 252
G+IL+ + +D HDTYYVVAHFH
Sbjct: 460 GIILSQAGVDRAYHDTYYVVAHFH 483
Score = 48.8 bits (111), Expect = 1e-04
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +3
Query: 348 KIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
++ F+ FIG NITFFPQHFLG G+PRR
Sbjct: 516 QVHFWVFFIGTNITFFPQHFLGRQGMPRR 544
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 96.3 bits (229), Expect = 6e-19
Identities = 45/85 (52%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Frame = +1
Query: 4 GIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQ--INYNPNIL*RLGFVFLFTVGGL 177
G+++DTRA+FTS TI+I++PTG K+ L T T I ++ ++L L F+ FT GG
Sbjct: 5 GLEVDTRAFFTSTTILISIPTGTKVFNWLCTYMSTNFGITHSSSLL-SLLFICTFTFGGT 63
Query: 178 TGVILANSSIDITLHDTYYVVAHFH 252
TGVIL N +ID+ LHDTYYV+AHFH
Sbjct: 64 TGVILGNGAIDVALHDTYYVIAHFH 88
Score = 34.3 bits (75), Expect = 2.6
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 315 FTGLSLN-SYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
F G +L + I+ + F+GV +TF P HFLG +PRR
Sbjct: 110 FFGKTLRENTIIVLWSILFFVGVVLTFLPMHFLGFNVMPRR 150
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 95.5 bits (227), Expect = 1e-18
Identities = 45/84 (53%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
Frame = +1
Query: 4 GIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQ-INYNPNIL*RLGFVFLFTVGGLT 180
G+DIDTR+YFT+AT+IIAVPTGIKI L+++ + + N ++ F+ F +GG +
Sbjct: 279 GLDIDTRSYFTAATMIIAVPTGIKIFTWLSSLLTMKRMTLNSLTFLQVSFIVSFAIGGTS 338
Query: 181 GVILANSSIDITLHDTYYVVAHFH 252
G+IL+N+S+D LHDTYYVVAHFH
Sbjct: 339 GIILSNASVDHYLHDTYYVVAHFH 362
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 95.1 bits (226), Expect = 1e-18
Identities = 43/84 (51%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Frame = +1
Query: 4 GIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINY-NPNIL*RLGFVFLFTVGGLT 180
G+++DTRAYFTS TI+I++PTG K+ + T + + + L L F+ FT GG T
Sbjct: 301 GLEVDTRAYFTSTTILISIPTGTKVFNWICTYMSSNFGMIHSSSLLSLLFICTFTFGGTT 360
Query: 181 GVILANSSIDITLHDTYYVVAHFH 252
GVIL N++ID+ LHDTYYV+AHFH
Sbjct: 361 GVILGNAAIDVALHDTYYVIAHFH 384
Score = 33.5 bits (73), Expect = 4.6
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 369 FIGVNITFFPQHFLGLAGIPRR 434
F+GV +TF P HFLG +PRR
Sbjct: 425 FVGVILTFLPMHFLGFNVMPRR 446
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 92.7 bits (220), Expect = 7e-18
Identities = 40/55 (72%), Positives = 48/55 (87%)
Frame = +1
Query: 88 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 252
LAT+HG I ++P +L LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHFH
Sbjct: 325 LATLHGGTIKWDPPMLWALGFIFLFTVGGLTGIVLANSSLDIALHDTYYVVAHFH 379
Score = 66.5 bits (155), Expect = 5e-10
Identities = 29/43 (67%), Positives = 34/43 (79%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+PLFTG +LNS K F +F GVN+TFFPQHFLGLAG+PRR
Sbjct: 398 FPLFTGYTLNSAWAKAHFGVMFTGVNLTFFPQHFLGLAGMPRR 440
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 92.3 bits (219), Expect = 9e-18
Identities = 45/54 (83%), Positives = 48/54 (88%)
Frame = +1
Query: 28 YFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 189
YFTSAT+IIAVPTGIKI LAT HGTQINY+P+IL LGFVFLFTVGGLTGVI
Sbjct: 97 YFTSATMIIAVPTGIKIFSWLATFHGTQINYSPSILWSLGFVFLFTVGGLTGVI 150
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 91.5 bits (217), Expect = 2e-17
Identities = 43/85 (50%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNP-NIL*RLGFVFLFTVGGL 177
VG++ DTRAYF++ TI+IA+PTG KI L T + ++ L F+ LFT+GG
Sbjct: 8 VGLEGDTRAYFSAMTIMIAIPTGTKIFNWLGTYMASHNTTRTIDLWAALCFILLFTLGGT 67
Query: 178 TGVILANSSIDITLHDTYYVVAHFH 252
TGV++ N+ +DI LHDTYY+VAHFH
Sbjct: 68 TGVVMGNAGMDIALHDTYYIVAHFH 92
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 88.2 bits (209), Expect = 2e-16
Identities = 38/84 (45%), Positives = 60/84 (71%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 180
VG+D+DTR YF+SAT++IA+PT IK+ + + + + + F+ +F +GG+T
Sbjct: 52 VGLDVDTRVYFSSATLLIALPTSIKVFSWMVGLRRMALASSAAWY-VVAFLLMFLLGGVT 110
Query: 181 GVILANSSIDITLHDTYYVVAHFH 252
G++LANS +D+ +HD+YYVVAHFH
Sbjct: 111 GLVLANSEVDLVMHDSYYVVAHFH 134
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 85.8 bits (203), Expect = 8e-16
Identities = 42/85 (49%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINY-NPNIL*RLGFVFLFTVGGL 177
VG D T +F+S T+II VPTGIK+ L ++ + +P + +GF+FLFTVGG+
Sbjct: 385 VGFDSLTGVFFSSITMIIGVPTGIKVFSWLYMLNSCGMRVLDPIVWWLVGFIFLFTVGGV 444
Query: 178 TGVILANSSIDITLHDTYYVVAHFH 252
TGV L+ S++DI HDT++VVAHFH
Sbjct: 445 TGVALSASALDILFHDTWFVVAHFH 469
Score = 50.8 bits (116), Expect = 3e-05
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+P G SLN Y+L+ + +G N+ FFP H+LG+ G+PRR
Sbjct: 488 WPFIVGYSLNKYLLQGHWLLSMVGFNLCFFPMHYLGIHGLPRR 530
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 81.8 bits (193), Expect = 1e-14
Identities = 38/77 (49%), Positives = 52/77 (67%)
Frame = +1
Query: 22 RAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 201
R +F + T++IAVPTGIKI T+ G +I N +L GF+ F +GGLTGV++A+
Sbjct: 312 RMFFMATTMLIAVPTGIKIFSWCGTLWGGKIQLNSAMLFAFGFLSSFMIGGLTGVMVASV 371
Query: 202 SIDITLHDTYYVVAHFH 252
DI +HDTY+VV HFH
Sbjct: 372 PFDIHVHDTYFVVGHFH 388
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+P TG +N + ++ F FIG+N+TF P H LGL G+ RR
Sbjct: 407 FPKMTGRMVNEPLGRLHFILTFIGMNLTFMPMHELGLMGMNRR 449
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 80.2 bits (189), Expect = 4e-14
Identities = 35/84 (41%), Positives = 55/84 (65%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 180
VG+D+D+RAYF +I+I +PT +K+ + + T + + + F+F+F +G +T
Sbjct: 297 VGMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFLIGAVT 356
Query: 181 GVILANSSIDITLHDTYYVVAHFH 252
G+ L+N IDI LHDTY+VV HFH
Sbjct: 357 GLFLSNVGIDIMLHDTYFVVGHFH 380
Score = 37.1 bits (82), Expect = 0.37
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +3
Query: 324 LSLNSYILKIQFF--TIFIGVNITFFPQHFLGLAGIPRR 434
L + Y+ + +F T+FIG N+ FFP H LG+ PRR
Sbjct: 403 LPIELYLFWMFYFISTLFIGSNMLFFPMHSLGMYAFPRR 441
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 80.2 bits (189), Expect = 4e-14
Identities = 39/83 (46%), Positives = 52/83 (62%)
Frame = +1
Query: 4 GIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 183
G+ A F AT+ IA+PTGIKI L TI G + Y +L + F+ F +GG+TG
Sbjct: 304 GLGPIANAIFAVATMAIAIPTGIKIFNWLLTIWGGNVKYTTAMLYAVSFIPSFVLGGVTG 363
Query: 184 VILANSSIDITLHDTYYVVAHFH 252
V+LA ++ D HDTY+VVAHFH
Sbjct: 364 VMLAAAAADYQFHDTYFVVAHFH 386
Score = 46.4 bits (105), Expect = 6e-04
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+P G L+ + KI F FIG ++TFF QHF+GL G+PRR
Sbjct: 405 WPKMFGKILHETMGKISFVLFFIGFHLTFFIQHFVGLMGMPRR 447
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 79.4 bits (187), Expect = 7e-14
Identities = 38/85 (44%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LAT-IHGTQINYNPNIL*RLGFVFLFTVGGL 177
VG+DID+R+YF+ AT II++PT +K+ + T G N + F+ F GG
Sbjct: 304 VGLDIDSRSYFSIATSIISIPTSVKMFSYINTWASGRGFRGNNSSWSFFSFLICFCFGGF 363
Query: 178 TGVILANSSIDITLHDTYYVVAHFH 252
TG++L++ S+DI LHDTY+VV HFH
Sbjct: 364 TGLLLSSGSLDIMLHDTYFVVGHFH 388
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 78.6 bits (185), Expect = 1e-13
Identities = 38/84 (45%), Positives = 54/84 (64%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 180
VG+ + F+ T+ IAVPTG+KI L+T+ G QI + +L +GF+ FT+GGL+
Sbjct: 314 VGMGPVVNSIFSLTTMAIAVPTGVKIFNWLSTMWGGQIRFTAAMLFAIGFIASFTIGGLS 373
Query: 181 GVILANSSIDITLHDTYYVVAHFH 252
G + A + D HDTY+VVAHFH
Sbjct: 374 GFMHAAAPSDAQQHDTYFVVAHFH 397
Score = 34.7 bits (76), Expect = 2.0
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+P G L+ + + F IF G + FP H LGL G+PRR
Sbjct: 416 FPKVFGRMLDERLGRWSFALIFTGFHTFAFPFHILGLLGMPRR 458
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 78.6 bits (185), Expect = 1e-13
Identities = 31/74 (41%), Positives = 52/74 (70%)
Frame = +1
Query: 31 FTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 210
F AT++IA+P+ +K L T++G ++ + +L L FV +F +GGL+G+ +A + +D
Sbjct: 353 FMVATMMIALPSAVKTFNWLGTVYGGKVQFTTPMLFALSFVSMFVIGGLSGIFMAATPVD 412
Query: 211 ITLHDTYYVVAHFH 252
I +HDTY++VAHFH
Sbjct: 413 IVIHDTYFIVAHFH 426
Score = 39.9 bits (89), Expect = 0.053
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+P G +N KI F FI +N TFF H LG+ G PRR
Sbjct: 445 FPKMFGRMMNETAGKIHFALTFIFLNGTFFTMHILGVGGFPRR 487
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 77.8 bits (183), Expect = 2e-13
Identities = 34/84 (40%), Positives = 56/84 (66%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 180
+G + A+F AT+II++PTG+K+ L TI+ ++ + IL LGF+ F++GG+T
Sbjct: 339 MGSGANVNAFFGIATMIISIPTGVKLFNWLFTIYKGRLRFETPILWTLGFMVTFSIGGMT 398
Query: 181 GVILANSSIDITLHDTYYVVAHFH 252
GV+LA D LH++ +++AHFH
Sbjct: 399 GVLLAVPGADYVLHNSLFLIAHFH 422
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 77.8 bits (183), Expect = 2e-13
Identities = 35/84 (41%), Positives = 54/84 (64%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 180
VG+ + +F +++IA+PTGIK+ AT+ G +I +N ++ + F+ F +GGLT
Sbjct: 313 VGLGMYADIFFAVGSLLIAIPTGIKVFNWTATLWGGEIQFNTSLHFAVAFLLQFVIGGLT 372
Query: 181 GVILANSSIDITLHDTYYVVAHFH 252
G++ A ID L DTY+VVAHFH
Sbjct: 373 GIMFAAVPIDWQLTDTYFVVAHFH 396
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/43 (51%), Positives = 28/43 (65%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+P TG LN I +QF+ +G N+TF QHFLGL G+PRR
Sbjct: 415 FPKMTGRMLNERIGILQFWLWVLGFNMTFMVQHFLGLMGMPRR 457
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 77.8 bits (183), Expect = 2e-13
Identities = 36/84 (42%), Positives = 56/84 (66%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 180
VG+ A+F +A+ +IAVPTG+KI LAT+ +N ++L +GF+ +F +GG++
Sbjct: 312 VGLGPLANAFFGAASFLIAVPTGVKIFNWLATMWQGSLNLTTSMLYAIGFISMFIIGGIS 371
Query: 181 GVILANSSIDITLHDTYYVVAHFH 252
GV LA+ I++ D+YYVVAH H
Sbjct: 372 GVTLASPPINVQQTDSYYVVAHMH 395
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+P TG L+ + K QF+ + I N+TFFP H G AG+PRR
Sbjct: 414 FPKMTGRMLDERLGKWQFWLMLISFNLTFFPMHLSGNAGMPRR 456
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 77.8 bits (183), Expect = 2e-13
Identities = 35/74 (47%), Positives = 50/74 (67%)
Frame = +1
Query: 31 FTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 210
F T+IIAVP+ +K + T+ I + P ++ +G V +F GG+TG+IL N+++D
Sbjct: 366 FMFLTLIIAVPSAVKSFNYITTLWRGNIIFTPAMMFSIGLVSMFISGGVTGIILGNNAMD 425
Query: 211 ITLHDTYYVVAHFH 252
I LHDTYYVVAHFH
Sbjct: 426 IQLHDTYYVVAHFH 439
Score = 42.7 bits (96), Expect = 0.007
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+P G ++ + I F+ F+G + FFP H++G+AG PRR
Sbjct: 458 FPKMFGRMMDEKLGYIHFWFTFVGAYLVFFPMHYIGIAGFPRR 500
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 77.0 bits (181), Expect = 4e-13
Identities = 37/86 (43%), Positives = 61/86 (70%), Gaps = 3/86 (3%)
Frame = +1
Query: 4 GIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYN---PNIL*RLGFVFLFTVGG 174
GI + +F++A++ +A+P+GI++ +ATI ++ + P++ LGF+F+FTVGG
Sbjct: 321 GIPSLSLGFFSAASMAVAIPSGIQVFSWIATIASSKERFRITTPSLF-VLGFLFIFTVGG 379
Query: 175 LTGVILANSSIDITLHDTYYVVAHFH 252
+TGV++A ID +HDTY+VVAHFH
Sbjct: 380 VTGVMVALVPIDFQVHDTYFVVAHFH 405
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +3
Query: 309 PLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
P F+ L+ + + F+ +FIG N+TFFP H GL G+PRR
Sbjct: 425 PAFSRNMLSERLGRWVFWLMFIGFNVTFFPMHMAGLLGMPRR 466
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 76.6 bits (180), Expect = 5e-13
Identities = 32/84 (38%), Positives = 54/84 (64%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 180
+G +F AT++I++PTG+K+ L TI+ ++ + I+ LGF+ F++GG+T
Sbjct: 338 MGAGASVNTFFGLATMLISIPTGVKLFNWLFTIYQGRLRFTAPIMWTLGFMITFSIGGMT 397
Query: 181 GVILANSSIDITLHDTYYVVAHFH 252
GV+LA D LH++ +V+AHFH
Sbjct: 398 GVLLAVPGADFVLHNSLFVIAHFH 421
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 74.9 bits (176), Expect = 2e-12
Identities = 34/76 (44%), Positives = 53/76 (69%)
Frame = +1
Query: 25 AYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 204
++FT++++ IAVP G++I LATI + + L +GF+ +F +GGLTGV++A+
Sbjct: 318 SFFTASSMAIAVPAGLQIFCWLATIWAGRPIFKTPFLFVIGFIVVFVIGGLTGVMVASVP 377
Query: 205 IDITLHDTYYVVAHFH 252
D +HDTY+VVAHFH
Sbjct: 378 FDTQVHDTYFVVAHFH 393
Score = 46.8 bits (106), Expect = 5e-04
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+P TG ++ + + F IF G N+TFFP H LGL G+PRR
Sbjct: 412 FPKLTGRMMSETLGRWSFGLIFSGFNLTFFPMHILGLQGMPRR 454
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/83 (43%), Positives = 54/83 (65%)
Frame = +1
Query: 4 GIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 183
G+ TR F+ T++IAVPTGIKI + T++ I++ +L LG VF+F +GGLTG
Sbjct: 251 GVPNWTRVLFSYTTLLIAVPTGIKIFNWMLTLYRGAIHFRSQMLYALGGVFMFLIGGLTG 310
Query: 184 VILANSSIDITLHDTYYVVAHFH 252
+ L +ID+ + D+ +VV HFH
Sbjct: 311 LPLGMVAIDLGVSDSLFVVGHFH 333
Score = 37.1 bits (82), Expect = 0.37
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+PL TG + K+ F+ IF G NI +F Q G+ G PRR
Sbjct: 352 FPLATGKYYPENLGKLSFWLIFAGANIFYFLQMVAGMLGNPRR 394
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 74.5 bits (175), Expect = 2e-12
Identities = 32/75 (42%), Positives = 54/75 (72%)
Frame = +1
Query: 28 YFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 207
+FT+++ +IA+P+G++I +AT+ G++ +L LGF +F +GGL+GV++A+
Sbjct: 325 FFTASSAMIAIPSGVQIFCWIATLWGSKPKLATPLLHVLGFFLIFIIGGLSGVMVASVPF 384
Query: 208 DITLHDTYYVVAHFH 252
D+ HDTY+VVAHFH
Sbjct: 385 DMQAHDTYFVVAHFH 399
Score = 53.2 bits (122), Expect = 5e-06
Identities = 22/43 (51%), Positives = 29/43 (67%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
YP FTG ++ + K+ F+ F G N+TFFP H LGL G+PRR
Sbjct: 418 YPKFTGRMMSERLGKVAFWVTFAGFNLTFFPMHKLGLEGMPRR 460
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 74.5 bits (175), Expect = 2e-12
Identities = 32/70 (45%), Positives = 49/70 (70%)
Frame = +1
Query: 43 TIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLH 222
T++I++P G+ + + T++G I++ +L LGF+FLF +GGLTGV LA S+ + L
Sbjct: 309 TVLISIPVGLMVIGLVGTLYGGSISFETPMLYALGFIFLFLIGGLTGVPLALVSLTVHLS 368
Query: 223 DTYYVVAHFH 252
+TYYVV HFH
Sbjct: 369 ETYYVVGHFH 378
Score = 38.3 bits (85), Expect = 0.16
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+P TG N I K F+ F+GVNI F+ +G+ G+PRR
Sbjct: 397 FPKMTGKMYNETIGKWAFWITFVGVNIVFWIMMDIGVEGMPRR 439
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 74.5 bits (175), Expect = 2e-12
Identities = 31/75 (41%), Positives = 54/75 (72%)
Frame = +1
Query: 28 YFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 207
+F++AT+++ +PTG+K+ T+ ++ + P +L LG +FL VGGLTG++LA +I
Sbjct: 366 FFSTATMLVGIPTGVKVFNWALTLWRGRLRFEPPMLWALGALFLLLVGGLTGMMLAIPAI 425
Query: 208 DITLHDTYYVVAHFH 252
+ T+H++ +VVAHFH
Sbjct: 426 NYTVHNSVFVVAHFH 440
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 73.7 bits (173), Expect = 3e-12
Identities = 34/83 (40%), Positives = 52/83 (62%)
Frame = +1
Query: 4 GIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 183
GID R+ F + ++ I++P+ +K+ + T+ ++ +L +GFV F +GG+TG
Sbjct: 349 GIDPRIRSSFMAVSLAISIPSAVKVFNWITTMWNGKLRLTAPMLFCIGFVQNFIIGGVTG 408
Query: 184 VILANSSIDITLHDTYYVVAHFH 252
V LA ID+ LHDTYYVV HFH
Sbjct: 409 VFLAVIPIDLILHDTYYVVGHFH 431
Score = 35.9 bits (79), Expect = 0.86
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+P+ TG + F+T +G N TF +LG G+PRR
Sbjct: 450 FPMVTGRMYQKRLAHAHFWTALVGSNATFLAMLWLGYGGMPRR 492
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 73.7 bits (173), Expect = 3e-12
Identities = 32/74 (43%), Positives = 49/74 (66%)
Frame = +1
Query: 31 FTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 210
F T +IAVPTG+K+ + T+ G ++ + LGF+F F +GG+TGV+L+ + +D
Sbjct: 314 FAFFTALIAVPTGVKLFNIIGTLWGGKLQMKTPLYWVLGFIFNFLLGGITGVMLSMTPLD 373
Query: 211 ITLHDTYYVVAHFH 252
HD+Y+VVAHFH
Sbjct: 374 YQFHDSYFVVAHFH 387
Score = 37.5 bits (83), Expect = 0.28
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+P TG + + ++ F+ +G +TF PQ+ LG G+PRR
Sbjct: 406 WPKMTGRMYDERLGRLHFWLFLVGYLLTFLPQYALGYLGMPRR 448
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 73.3 bits (172), Expect = 5e-12
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = +1
Query: 28 YFTSATIIIAVPTGIKIXR*LATIHGTQ-INYNPNIL*RLGFVFLFTVGGLTGVILANSS 204
YFT+ TI+IA+PTG KI + T+ + I +L + F+ F +GG TGV+L N+
Sbjct: 309 YFTTVTILIALPTGNKIFNWVTTLQCVESIKSLGLVLFTVLFIVNFVIGGTTGVVLGNAG 368
Query: 205 IDITLHDTYYVVAHFH 252
ID+ LHDT YVV HFH
Sbjct: 369 IDLALHDTVYVVGHFH 384
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 72.9 bits (171), Expect = 6e-12
Identities = 32/81 (39%), Positives = 50/81 (61%)
Frame = +1
Query: 10 DIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 189
D R AT+ +A+P+G+K+ +AT++G +I +L L F+ F VGG+TGV
Sbjct: 307 DFAPRVAMAIATMAVAIPSGVKVFNWVATLYGGRIQLKAPMLFMLTFLLFFIVGGVTGVF 366
Query: 190 LANSSIDITLHDTYYVVAHFH 252
++D+ LHDTY+V+ HFH
Sbjct: 367 FPVITLDLHLHDTYFVLGHFH 387
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 72.9 bits (171), Expect = 6e-12
Identities = 35/83 (42%), Positives = 50/83 (60%)
Frame = +1
Query: 4 GIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 183
G+D RA F + ++ IAVP+ +K + T+ I +L +GFV F +GG+TG
Sbjct: 380 GLDPRLRASFMAVSLAIAVPSAVKTFNWITTMWNGNIRLTTPMLFSVGFVANFILGGVTG 439
Query: 184 VILANSSIDITLHDTYYVVAHFH 252
V LA+ +D+ LH TYYVV HFH
Sbjct: 440 VFLASIPVDLVLHATYYVVGHFH 462
Score = 42.3 bits (95), Expect = 0.010
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+PL+TG + K+ F+ IG NITFF LG G+PRR
Sbjct: 481 FPLYTGRMYQRTLGKMHFWLSMIGTNITFFAMILLGYGGMPRR 523
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 72.5 bits (170), Expect = 8e-12
Identities = 31/76 (40%), Positives = 53/76 (69%)
Frame = +1
Query: 25 AYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 204
A F A+++I +PTG+KI + T+ +I ++ ++ L F+FLF +GG+TG++LAN
Sbjct: 366 AVFGIASMLIGIPTGVKIYDWMWTMLRGRIRFSVPMIYSLAFIFLFVIGGITGIMLANPI 425
Query: 205 IDITLHDTYYVVAHFH 252
+D +H+T ++VAHFH
Sbjct: 426 LDYQVHNTVFLVAHFH 441
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 71.7 bits (168), Expect = 1e-11
Identities = 31/84 (36%), Positives = 55/84 (65%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 180
+G ++F+ T+ I++PTG+KI L T++ +I++ +L L F+ F +GG+T
Sbjct: 334 MGNSASVNSFFSITTMAISIPTGVKIFNWLFTMYKGRISFTTPMLWALAFIPNFVIGGVT 393
Query: 181 GVILANSSIDITLHDTYYVVAHFH 252
GV+LA ++ D H+TY++V+HFH
Sbjct: 394 GVMLAMAAADYQYHNTYFLVSHFH 417
Score = 49.6 bits (113), Expect = 6e-05
Identities = 24/43 (55%), Positives = 27/43 (62%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
YP G LN I K F+ IG NI FFPQ+FLGL G+PRR
Sbjct: 436 YPKMFGHKLNERIGKWFFWIFMIGFNICFFPQYFLGLQGMPRR 478
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 71.7 bits (168), Expect = 1e-11
Identities = 33/75 (44%), Positives = 47/75 (62%)
Frame = +1
Query: 28 YFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 207
+F + T+IIA+PT IK+ + T+ I+ +L LGF+ F GGLTG+ L N +
Sbjct: 343 FFATTTLIIAIPTAIKVYNWVLTLWHGDIHLTVPMLFALGFIITFVNGGLTGLFLGNVVV 402
Query: 208 DITLHDTYYVVAHFH 252
D+ L DT +VVAHFH
Sbjct: 403 DVPLSDTMFVVAHFH 417
Score = 52.0 bits (119), Expect = 1e-05
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
YP TG LN + K F+ F+G + FFP H+LGL G+PRR
Sbjct: 436 YPKVTGRMLNDVLGKFHFWVTFLGAYLIFFPMHYLGLLGVPRR 478
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 70.9 bits (166), Expect = 2e-11
Identities = 31/74 (41%), Positives = 49/74 (66%)
Frame = +1
Query: 31 FTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 210
F +T++IA+P+ IK ATI G ++ +N L + F+ +F VGGL+G+ +A +D
Sbjct: 356 FMVSTMMIALPSAIKTFNWTATIWGGKLEFNTVTLNCIAFLSMFIVGGLSGIFMAAVPVD 415
Query: 211 ITLHDTYYVVAHFH 252
+ HDTY++VAHFH
Sbjct: 416 VYFHDTYFIVAHFH 429
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+P G +N + K F FIG N TFFP HFLG+ G+PRR
Sbjct: 448 FPKMFGRMMNEKLGKTHFVLTFIGANGTFFPMHFLGMQGMPRR 490
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 69.3 bits (162), Expect = 8e-11
Identities = 32/36 (88%), Positives = 33/36 (91%)
Frame = +2
Query: 548 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 655
NQRI LFSLN+PSSIE YQNLPPAEHSYNELPIL N
Sbjct: 451 NQRIILFSLNMPSSIEWYQNLPPAEHSYNELPILSN 486
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 67.7 bits (158), Expect = 2e-10
Identities = 35/84 (41%), Positives = 49/84 (58%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 180
VGI + F +T+I+AVPTG+KI + T+ G +I +GF+F F +GG+T
Sbjct: 312 VGIPEAWQIAFMISTLIVAVPTGVKIFNLIGTLWGGRILMRMPTYWLIGFIFNFLIGGIT 371
Query: 181 GVILANSSIDITLHDTYYVVAHFH 252
GV L D + +YYVVAHFH
Sbjct: 372 GVSLGMIPFDYQVTMSYYVVAHFH 395
Score = 39.1 bits (87), Expect = 0.092
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+P TG L+ + F+ IG +TF PQ+ LGL G+PRR
Sbjct: 414 WPKMTGRFLDEKVGLAHFWLFMIGSWLTFLPQYILGLLGMPRR 456
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 67.7 bits (158), Expect = 2e-10
Identities = 30/84 (35%), Positives = 54/84 (64%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 180
VG+D +R +++ TI+I++P IK+ ++ + + L + F+ LF V G T
Sbjct: 455 VGLDHRSRTMYSTITIMISMPATIKVVNWTLSLVNGALKVDLPFLFSMSFLLLFLVAGFT 514
Query: 181 GVILANSSIDITLHDTYYVVAHFH 252
G+ L++ S+++++HDT+YVVAHFH
Sbjct: 515 GMWLSHVSLNVSMHDTFYVVAHFH 538
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 67.3 bits (157), Expect = 3e-10
Identities = 31/74 (41%), Positives = 46/74 (62%)
Frame = +1
Query: 31 FTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 210
F+ T+II +P + L +++G+++ N L LGF+ +F GG++G LA SID
Sbjct: 352 FSFPTLIITIPATVLTLIWLGSLYGSRLRINSASLFALGFISMFVSGGVSGFFLAQPSID 411
Query: 211 ITLHDTYYVVAHFH 252
I LH TY+VV HFH
Sbjct: 412 IYLHATYFVVGHFH 425
Score = 39.5 bits (88), Expect = 0.069
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+P TG +N + KI F+ FIG F P H+LG+ G RR
Sbjct: 444 FPKMTGHMMNETLGKIHFWGTFIGAYCIFMPFHYLGMVGNVRR 486
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 67.3 bits (157), Expect = 3e-10
Identities = 28/73 (38%), Positives = 46/73 (63%)
Frame = +1
Query: 34 TSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDI 213
++ T+ IA+P+G+K+ AT++G +I Y + + F+ +F +GG+TGV ID
Sbjct: 304 SATTMAIAIPSGVKVLNWTATLYGGEIRYKTPTILLISFIVMFLLGGITGVFFPLVPIDY 363
Query: 214 TLHDTYYVVAHFH 252
L+ TY+VV HFH
Sbjct: 364 ALNGTYFVVGHFH 376
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 66.9 bits (156), Expect = 4e-10
Identities = 31/83 (37%), Positives = 55/83 (66%)
Frame = +1
Query: 4 GIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 183
G+ I + + F++A+ ++AVPTG++I +AT+ + + LGF+F+F +GG+TG
Sbjct: 337 GLPILSLSLFSAASTMVAVPTGVQIFCFIATLSQGKPRLTVPMHFILGFLFIFVLGGMTG 396
Query: 184 VILANSSIDITLHDTYYVVAHFH 252
V++A ++ HD+Y+VVAH H
Sbjct: 397 VMVAAVPFNLQAHDSYFVVAHLH 419
Score = 39.9 bits (89), Expect = 0.053
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +3
Query: 309 PLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
P FTG ++ + K F+ +F G N+ FF H G+ G+PRR
Sbjct: 439 PHFTGRMMSERLGKWVFWLMFSGFNLAFFMMHLTGMRGMPRR 480
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 66.9 bits (156), Expect = 4e-10
Identities = 37/72 (51%), Positives = 43/72 (59%)
Frame = +2
Query: 257 SINRSSICNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTI 436
S N SSICNY IY L+ + F K KNSI+ NIY SK NIFS TFF +T +
Sbjct: 84 SFNSSSICNYISIYPLMPPLNWTFYKSKMIKNSIYNNIYSSKSNIFSPTFFSACRDTPPL 143
Query: 437 FRLSRLIYFMKY 472
F SRLI +KY
Sbjct: 144 FWFSRLILLLKY 155
Score = 32.7 bits (71), Expect = 8.0
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 84 MTGYNTWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQF 200
MT Y +W++N L P + FC FI+ N +FSQF
Sbjct: 26 MTCYPSWDTNLLHPSPPLSFSFCFFIYRWSFNSGSFSQF 64
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 66.1 bits (154), Expect = 7e-10
Identities = 30/74 (40%), Positives = 48/74 (64%)
Frame = +1
Query: 31 FTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 210
F T++I++P+ + + + T+ + Y+ +L LG VF+F VGGLTG+ L + S+D
Sbjct: 342 FMLFTLLISIPSMVVVVNWVLTLWQGSLRYDTPMLFALGTVFVFGVGGLTGLFLGDISMD 401
Query: 211 ITLHDTYYVVAHFH 252
+ LHDT +VV HFH
Sbjct: 402 LYLHDTMFVVGHFH 415
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 66.1 bits (154), Expect = 7e-10
Identities = 28/75 (37%), Positives = 48/75 (64%)
Frame = +1
Query: 28 YFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 207
+F+ T +I+VPTG+K + T+ I + ++ +GF+ F GGLTG++LA+ +
Sbjct: 326 FFSFMTFLISVPTGVKFFNWVGTMWKGHITWETPMIWSVGFMATFLFGGLTGIMLASPPL 385
Query: 208 DITLHDTYYVVAHFH 252
D L D+Y+++AHFH
Sbjct: 386 DFHLADSYFLIAHFH 400
Score = 39.9 bits (89), Expect = 0.053
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+P TG ++ + KI F+ F+G + TF QH++G G+PRR
Sbjct: 419 FPKMTGRMMDERLGKIHFWLTFVGFHGTFLIQHWVGNMGMPRR 461
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 65.7 bits (153), Expect = 9e-10
Identities = 32/77 (41%), Positives = 47/77 (61%)
Frame = +1
Query: 22 RAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 201
R F T++IA+PTG+K+ L T+ + N +L +G + F G+TGV+LA
Sbjct: 327 RHIFMFTTMLIAIPTGVKVFAWLGTLWAGNLRLNTPMLFCIGGLINFIFAGITGVMLATV 386
Query: 202 SIDITLHDTYYVVAHFH 252
IDI + +TY+VVAHFH
Sbjct: 387 PIDIHVGNTYFVVAHFH 403
Score = 40.3 bits (90), Expect = 0.040
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+P FTG + K+ F FIG + + P H+ GL G+PRR
Sbjct: 422 FPKFTGKMYYEGLGKVHFVLTFIGATLNWLPLHWAGLLGMPRR 464
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 65.7 bits (153), Expect = 9e-10
Identities = 36/72 (50%), Positives = 42/72 (58%)
Frame = +2
Query: 260 INRSSICNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIF 439
I S CNY GIY L+ I K L KNSIFYNI+ K IFSTTFF S +T T+
Sbjct: 85 IYSSCFCNYIGIYSLMPLINSTNNKSLMIKNSIFYNIFSGKSYIFSTTFFSISSDTPTML 144
Query: 440 RLSRLIYFMKYN 475
S LI +KY+
Sbjct: 145 SFSSLIQLLKYH 156
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +1
Query: 13 IDTRAYFTSATIIIAVPTGIKIXR*LAT 96
+DTRAYFTSAT+IIAVPTGIKI LAT
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLAT 29
>UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46;
Neoptera|Rep: Cytochrome c oxidase subunit I - Eueides
tales
Length = 95
Score = 65.3 bits (152), Expect = 1e-09
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = +2
Query: 548 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 655
NQR+ LFSLN+PSSIE YQN PP+EHSYNELPIL N
Sbjct: 39 NQRMILFSLNMPSSIEWYQNFPPSEHSYNELPILSN 74
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 63.3 bits (147), Expect = 5e-09
Identities = 28/74 (37%), Positives = 42/74 (56%)
Frame = +1
Query: 31 FTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 210
F T+I+ V T IK+ + T++ + + GF+F GG+TG+ L S+D
Sbjct: 330 FGVLTMIVGVFTAIKVFNWVGTVYKGAVEFKTPFAYFCGFLFFTVFGGMTGIALGTVSLD 389
Query: 211 ITLHDTYYVVAHFH 252
+ HDTY+VVAHFH
Sbjct: 390 VAWHDTYFVVAHFH 403
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 62.9 bits (146), Expect = 7e-09
Identities = 26/75 (34%), Positives = 49/75 (65%)
Frame = +1
Query: 28 YFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 207
+F+ +T+IIA+PTG+KI + TI + + + F+ +F++GG +GVIL+ ++
Sbjct: 342 FFSISTMIIAIPTGVKIFNWIFTILFSNFKKDILFFWFISFIIIFSIGGFSGVILSIPNL 401
Query: 208 DITLHDTYYVVAHFH 252
D H++ +++AHFH
Sbjct: 402 DFIFHNSMFLIAHFH 416
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/83 (34%), Positives = 52/83 (62%)
Frame = +1
Query: 4 GIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 183
G+ + +F++A+ + +PTGI++ +AT+ ++ +L G + +FT GGLTG
Sbjct: 337 GLPALSLGFFSAASEAVVIPTGIQLFAFVATLMVGRVKMILPMLWIAGGLAVFTAGGLTG 396
Query: 184 VILANSSIDITLHDTYYVVAHFH 252
V++A + D +HDTY++VAH H
Sbjct: 397 VMVAIAPFDWQVHDTYFIVAHLH 419
Score = 45.2 bits (102), Expect = 0.001
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
YP+ T +L+ + + F+ +F G N+TF P H GL G+PRR
Sbjct: 438 YPVITKKALSERLGRWSFWLLFTGFNVTFLPMHLTGLKGMPRR 480
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/76 (38%), Positives = 48/76 (63%)
Frame = +1
Query: 25 AYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 204
A+F +A+++I++P+ + + +ATI + + L GFV +F VGG++GV+ A
Sbjct: 338 AFFGAASMLISIPSAVAVFAWIATIWTGRPVFRTPFLYFAGFVLMFVVGGVSGVMTAAVP 397
Query: 205 IDITLHDTYYVVAHFH 252
+D L DTY+VVAH H
Sbjct: 398 LDWQLTDTYFVVAHLH 413
Score = 49.2 bits (112), Expect = 9e-05
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+P FTG +N K+ F+ + +G N+ FFP H GL G+PRR
Sbjct: 432 FPKFTGRMMNERFGKLTFWVVLVGFNLGFFPMHISGLLGMPRR 474
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 60.5 bits (140), Expect = 3e-08
Identities = 27/74 (36%), Positives = 42/74 (56%)
Frame = +1
Query: 31 FTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 210
F ++ + + T IK+ AT++ I + GF+F GG+TG+ LA S+D
Sbjct: 323 FGVLSMFVGIFTAIKVFNWTATLYKGSIYFATPFAYFAGFLFFLVFGGMTGIALATVSLD 382
Query: 211 ITLHDTYYVVAHFH 252
+ HDTY++VAHFH
Sbjct: 383 VHWHDTYFIVAHFH 396
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 60.5 bits (140), Expect = 3e-08
Identities = 28/76 (36%), Positives = 47/76 (61%)
Frame = +1
Query: 25 AYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 204
A+F++A+ ++AVPT +++ + T+ + +L L F F +GGLTGV++A
Sbjct: 318 AFFSAASTLVAVPTAVQLFIWIGTLAKGAPRLHLPMLWLLAFFATFVIGGLTGVMVAIVP 377
Query: 205 IDITLHDTYYVVAHFH 252
D +HDTY++VAH H
Sbjct: 378 FDWQVHDTYFIVAHLH 393
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 60.1 bits (139), Expect = 5e-08
Identities = 28/74 (37%), Positives = 44/74 (59%)
Frame = +1
Query: 31 FTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 210
F + T +++PTG + TI G ++ N +L L + F +GGLTG+ A+ D
Sbjct: 396 FMTITETVSIPTGFIYLSAIGTIWGGRLRINAAVLLVLMAMMNFLIGGLTGIFNADVPAD 455
Query: 211 ITLHDTYYVVAHFH 252
+ LH+TY+V+AHFH
Sbjct: 456 LQLHNTYWVIAHFH 469
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 60.1 bits (139), Expect = 5e-08
Identities = 29/83 (34%), Positives = 50/83 (60%)
Frame = +1
Query: 4 GIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 183
G +I TR +++ TI+I++P + + + T++ ++ Y +L +G + F +GG TG
Sbjct: 303 GTNIYTRLFYSITTILISIPFEMAVMSFIFTLYKGRLVYTVPMLFAVGALLNFIIGGSTG 362
Query: 184 VILANSSIDITLHDTYYVVAHFH 252
V L + +ID TY+VVAHFH
Sbjct: 363 VYLGSIAIDRGFRGTYWVVAHFH 385
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 59.3 bits (137), Expect = 8e-08
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Frame = +1
Query: 4 GIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNI----L*RLGFVFLFTVG 171
GI + ++F +A+ +A+P+G+++ +AT + I L LGF+F+F +G
Sbjct: 380 GIPQLSLSFFQAASTAVAIPSGMQVFAWIATFARGRATGRVRIATPTLFILGFLFIFVLG 439
Query: 172 GLTGVILANSSIDITLHDTYYVVAHFH 252
GLTGV++A D HD+Y++VAH H
Sbjct: 440 GLTGVMVAVIPFDWQAHDSYFIVAHLH 466
Score = 45.2 bits (102), Expect = 0.001
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +3
Query: 357 FFTIFIGVNITFFPQHFLGLAGIPRR 434
F +F+G NITFFP HF GLAG+PRR
Sbjct: 502 FGLMFVGFNITFFPMHFTGLAGMPRR 527
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 58.8 bits (136), Expect = 1e-07
Identities = 35/75 (46%), Positives = 38/75 (50%)
Frame = +1
Query: 28 YFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 207
Y SA P G+K + + G P I F GGLTGVILANSS
Sbjct: 223 YLXSAXXFXXGPPGVKFLGD-SYLSGNFNFXKPQIFMIFSIYFSIHGGGLTGVILANSSX 281
Query: 208 DITLHDTYYVVAHFH 252
DI LHDTYYVVAH H
Sbjct: 282 DIILHDTYYVVAHXH 296
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +2
Query: 347 KNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLIYFMK 469
KN+IF IYWSK+NIFS+T S NT+T+F LS ++FMK
Sbjct: 328 KNTIFSYIYWSKFNIFSSTLCSISSNTTTLFWLSSCLHFMK 368
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 58.4 bits (135), Expect = 1e-07
Identities = 28/83 (33%), Positives = 46/83 (55%)
Frame = +1
Query: 4 GIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 183
GI++ + F + TI I++P + + + T+ ++ + L LG + LF +GG+TG
Sbjct: 317 GINLPIKTIFMATTIGISLPFDLMVFSLIYTMAKGRVRFTTPFLFSLGALILFIIGGITG 376
Query: 184 VILANSSIDITLHDTYYVVAHFH 252
V L +D TY+VVAHFH
Sbjct: 377 VFLGAIVLDYQFRGTYWVVAHFH 399
Score = 33.5 bits (73), Expect = 4.6
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFP 398
YP TG N + KIQF F+G N+ +FP
Sbjct: 417 YPKITGKMYNETLGKIQFGVYFLGFNLLYFP 447
>UniRef50_O03826 Cluster: Cytochrome oxidase subunit I; n=21;
Prodoxidae|Rep: Cytochrome oxidase subunit I - Greya
powelli
Length = 52
Score = 57.2 bits (132), Expect = 3e-07
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +2
Query: 548 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 655
N+ I LFSLN+ SSIE QN PPAEHSYNELPIL N
Sbjct: 16 NKNIVLFSLNMNSSIEWLQNFPPAEHSYNELPILTN 51
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 56.4 bits (130), Expect = 6e-07
Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +1
Query: 25 AYFTSATIIIAVPTGIKIXR*LATI-HGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 201
A F++A+ ++AVPT +++ + T+ GT P ++ L F F +GGLTGV++A
Sbjct: 318 ALFSAASTLVAVPTAVQLFAWIGTLWRGTPEMRLP-MMWILAFFATFVIGGLTGVMVAVV 376
Query: 202 SIDITLHDTYYVVAHFH 252
D +HDT+++VAH H
Sbjct: 377 PFDWQVHDTHFIVAHLH 393
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 54.4 bits (125), Expect = 2e-06
Identities = 22/29 (75%), Positives = 26/29 (89%)
Frame = +3
Query: 348 KIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
KI F +F+GVN+TFFPQHFLGLAG+PRR
Sbjct: 400 KIHFGVMFVGVNLTFFPQHFLGLAGMPRR 428
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 53.2 bits (122), Expect = 5e-06
Identities = 28/72 (38%), Positives = 42/72 (58%)
Frame = +1
Query: 43 TIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLH 222
T I++PT + I +AT+ G + + IL L F +GG++GV ++ +ID +H
Sbjct: 337 TETISIPTSMLIVGLIATMIGGRHKFQTPILFALAASTSFMIGGVSGVTQSSLAIDTIVH 396
Query: 223 DTYYVVAHFH*F 258
YYVVAHFH F
Sbjct: 397 GDYYVVAHFHYF 408
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 52.0 bits (119), Expect = 1e-05
Identities = 26/43 (60%), Positives = 29/43 (67%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPN 129
VG+D DTRAYFTSAT+IIA+PTGIKI L N N N
Sbjct: 295 VGLDADTRAYFTSATMIIAIPTGIKIFSWLMNPFSKDKNKNKN 337
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/85 (29%), Positives = 43/85 (50%)
Frame = +1
Query: 4 GIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTG 183
G+ + F T+ + + + +AT+ +I ++ ++ +G + LF G G
Sbjct: 297 GMSFTEKTVFMLGTLAAVPASAMHVFNFVATMWNGRIRFDSPMMWSIGGIALFFSAGAGG 356
Query: 184 VILANSSIDITLHDTYYVVAHFH*F 258
V+ A +D T HDTY+VV HFH F
Sbjct: 357 VLNAAMPLDFTTHDTYWVVGHFHLF 381
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +3
Query: 306 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+P TG N + KI F F+G + FF QH LG+ G+PRR
Sbjct: 398 FPFVTGRMYNEKLGKIHFVFSFVGAVLLFFTQHILGIYGMPRR 440
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/26 (84%), Positives = 26/26 (100%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKI 78
VG+D+DTRAYFT+AT+IIAVPTGIKI
Sbjct: 4 VGMDVDTRAYFTAATMIIAVPTGIKI 29
>UniRef50_A1INK5 Cluster: Cytochrome c oxidase subunit I; n=71;
Pancrustacea|Rep: Cytochrome c oxidase subunit I -
Psilochaeta pampiana
Length = 76
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = +2
Query: 551 QRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 655
QR+ LFS+ L SSIE QN PPAEHSY+ELP+L N
Sbjct: 41 QRMVLFSIQLCSSIEWLQNSPPAEHSYSELPLLTN 75
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 50.0 bits (114), Expect = 5e-05
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL-*RLGFVFLFTVGGL 177
VG D+ T +F+S T+II VPTGIK+ L + ++ N I+ +GF+FLFT+GG
Sbjct: 35 VGFDVKTAVFFSSVTMIIGVPTGIKVFGWLYMLGTSRHCLNTVIVWWIIGFIFLFTMGGR 94
Query: 178 TG 183
G
Sbjct: 95 QG 96
>UniRef50_Q5VIA7 Cluster: Cytochrome oxidase subunit I; n=1; Psyche
norvegica|Rep: Cytochrome oxidase subunit I - Psyche
norvegica
Length = 63
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = +2
Query: 551 QRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 655
QRI LF N+ SSIE +QN PPA HSY+E+PIL N
Sbjct: 28 QRILLFPSNMTSSIEWFQNTPPANHSYDEMPILIN 62
>UniRef50_Q5W4C3 Cluster: Cytochrome oxidase subunit I; n=79;
Pterygota|Rep: Cytochrome oxidase subunit I -
Biopyrellia bipuncta
Length = 68
Score = 47.2 bits (107), Expect = 3e-04
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +2
Query: 548 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 655
+QR +F + L SS+E QN PPAEHSYNELP+L N
Sbjct: 32 SQRQVIFPVQLNSSMEWLQNTPPAEHSYNELPLLVN 67
>UniRef50_Q35528 Cluster: Cytochrome oxidase subunit I; n=39;
Aphidoidea|Rep: Cytochrome oxidase subunit I - Pemphigus
microsetosus
Length = 68
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +2
Query: 551 QRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 655
+++ +F LNL +SIE NLPP EHSY+ELP++ N
Sbjct: 33 KKMVMFKLNLNNSIEWIHNLPPLEHSYSELPLVTN 67
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 44.4 bits (100), Expect = 0.002
Identities = 24/43 (55%), Positives = 27/43 (62%)
Frame = +3
Query: 519 Y*LLFENQ*LTNELTYFL*ISHHQLNDIKIYHQQNIHIMNXQF 647
Y LLFENQ EL Y + LND KIY QQ+IH+MN QF
Sbjct: 465 YSLLFENQSFITELLYLPSMYLLLLNDTKIYLQQSIHMMNYQF 507
Score = 42.3 bits (95), Expect = 0.010
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +2
Query: 74 KFXDDWLQYMELKLIITLIFYED*VLYFYSQ*ED 175
KF DW +MELKLI+ L FYED L FY Q ED
Sbjct: 316 KFLVDWQPFMELKLIMVLQFYEDWDLCFYLQSED 349
Score = 39.5 bits (88), Expect = 0.069
Identities = 27/47 (57%), Positives = 27/47 (57%)
Frame = +1
Query: 343 Y*KFNFLQYLLE*I*HFFHNIF*V*LEYLDDIQIIQTHIFHEI*FLH 483
Y KFNFL Y E I F NIF LEYLDDI IIQ EI F H
Sbjct: 406 YSKFNFLLYSSELISLFSLNIFSGSLEYLDDILIIQILTSLEISFHH 452
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 44.0 bits (99), Expect = 0.003
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Frame = +1
Query: 7 IDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFL-----FTVG 171
+ +D RA+ T +T+++A +G+ + TI T Y+ LG FL F +G
Sbjct: 61 LPVDLRAWITVSTLVLASGSGLTVLNLGLTIL-TSKGYDYKD--PLGMTFLIALIGFIIG 117
Query: 172 GLTGVILANSSIDITLHDTYYVVAHFH 252
G+ + L + I+ +H+TYYVV HFH
Sbjct: 118 GVQALPLPINIINGVVHNTYYVVGHFH 144
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 42.7 bits (96), Expect = 0.007
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYNPNIL 135
VG+D++T +F+S T+II VPTGIK+ L + +++N IL
Sbjct: 58 VGLDVNTAVFFSSVTMIIRVPTGIKVFTWLYMLSNSRVNKXDPIL 102
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 41.5 bits (93), Expect = 0.017
Identities = 14/32 (43%), Positives = 25/32 (78%)
Frame = +1
Query: 157 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 252
LF +GG+TG++ A+ ++++ +H+T YV HFH
Sbjct: 354 LFFIGGITGIVNASYNVNLVVHNTAYVPGHFH 385
>UniRef50_Q6Y3P5 Cluster: Cytochrome oxidase subunit I; n=4;
Talitridae|Rep: Cytochrome oxidase subunit I - Talitrus
saltator
Length = 59
Score = 41.1 bits (92), Expect = 0.023
Identities = 14/36 (38%), Positives = 28/36 (77%)
Frame = +2
Query: 548 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPILRN 655
++R+ +F +++P+S+E + PPA+HSY++ P+L N
Sbjct: 23 SKRVYMFHMHMPTSLEWHHPSPPADHSYDDTPLLTN 58
>UniRef50_Q1XAB3 Cluster: Cytochrome oxidase subunit I; n=14;
Neoptera|Rep: Cytochrome oxidase subunit I - Kalotermes
flavicollis
Length = 57
Score = 40.7 bits (91), Expect = 0.030
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +2
Query: 548 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELPIL 649
N++I LF +SIE QNLPPAEHSY+ELP +
Sbjct: 21 NRQI-LFPTQTSNSIEWIQNLPPAEHSYSELPTI 53
>UniRef50_Q8WFY0 Cluster: Cytochrome oxidase subunit I; n=5;
Eumalacostraca|Rep: Cytochrome oxidase subunit I -
Paguristes turgidus
Length = 68
Score = 40.3 bits (90), Expect = 0.040
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +2
Query: 563 LFSLNLPSSIE*YQNLPPAEHSYNELPILRN 655
+FSL+L SSIE + PPA+HSY E+P++ N
Sbjct: 37 MFSLSLASSIEWEHSYPPADHSYMEIPMISN 67
>UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit I;
n=1; Aeropyrum pernix|Rep: Cytochrome c oxidase
(Ba3-type) subunit I - Aeropyrum pernix
Length = 548
Score = 39.5 bits (88), Expect = 0.069
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 151 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 252
+ LF GG+TG+I A+ ++ +H+T ++V HFH
Sbjct: 340 IILFANGGITGIINASFQLNTVVHNTTWIVGHFH 373
>UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 541
Score = 37.9 bits (84), Expect = 0.21
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +3
Query: 306 YPLFTGLSLNSY-ILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 434
+P TG +L +++ Q + FIG+ +T FP H++G+ G+PRR
Sbjct: 387 WPHLTGRALTHVRLMRWQLWLWFIGMIVTTFPWHWVGILGMPRR 430
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 121 NPNIL*RLGFVFLFT-VGGLTGVILANSSIDITLHDTYYVVAHFH 252
NP +L L F F+ GG G+I + +D T+H+T ++ HFH
Sbjct: 325 NPQML-ALAFSFVMLGFGGAGGLINMSYQLDTTIHNTQWITGHFH 368
>UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase,
subunit I 3; n=1; Natronomonas pharaonis DSM 2160|Rep:
Cytochrome-c-like terminal oxidase, subunit I 3 -
Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)
Length = 575
Score = 37.9 bits (84), Expect = 0.21
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Frame = +1
Query: 25 AYFTSATIIIAVPTGIKIXR*LATIHGTQINY-------NPNIL*RLGFVFLFT-VGGLT 180
A F S A+P G++ R + G + NP + + LF +GG+T
Sbjct: 316 AAFASMIHAFAIPAGLEAGRRQRGLGGGLFGWLTSGPWKNPVFSATIFSIILFGFMGGIT 375
Query: 181 GVILANSSIDITLHDTYYVVAHFH 252
GV++ +++T H+T+ V HFH
Sbjct: 376 GVLMGQLQLNMTWHNTFATVGHFH 399
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 37.5 bits (83), Expect = 0.28
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 1 VGIDIDTRAYFTSATIIIAVPTGIKIXR*LATIHG 105
VG D+ T +F+S T++I +PTGIK+ L + G
Sbjct: 59 VGYDVHTAVFFSSVTMVIGIPTGIKVFSWLIMLGG 93
>UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3;
Pyrobaculum|Rep: Cytochrome C oxidase subunit I -
Pyrobaculum aerophilum
Length = 557
Score = 37.5 bits (83), Expect = 0.28
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +1
Query: 151 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 252
+ LF + G +GV+ A+ +++ +H+T +VV HFH
Sbjct: 340 IILFGIAGFSGVVNASFNVNYNVHNTAWVVGHFH 373
>UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1;
Caldivirga maquilingensis IC-167|Rep: Cytochrome-c
oxidase precursor - Caldivirga maquilingensis IC-167
Length = 529
Score = 37.5 bits (83), Expect = 0.28
Identities = 21/71 (29%), Positives = 39/71 (54%)
Frame = +1
Query: 40 ATIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITL 219
+T+ I++ + + + LA + + I P + L +F + G +GV A + ++ L
Sbjct: 332 STMGISIVSAVSVFALLAMMWRSGIKMTPPYMFSLIAMFAWLEAGYSGVAQAIVAWNLYL 391
Query: 220 HDTYYVVAHFH 252
H+T +VVAHFH
Sbjct: 392 HNTLWVVAHFH 402
>UniRef50_Q8HN76 Cluster: Cytochrome c oxidase subunit I; n=21;
Aphidomorpha|Rep: Cytochrome c oxidase subunit I -
Phylloxera sp. DAD-2001a
Length = 83
Score = 37.1 bits (82), Expect = 0.37
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +2
Query: 551 QRINLFSLNLPSSIE*YQNLPPAEHSYNELPIL 649
+++ +F LNL +SI N+PP H+Y+ELP++
Sbjct: 48 KKMTIFKLNLNNSIGWIHNMPPIGHTYSELPLI 80
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 37.1 bits (82), Expect = 0.37
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = +1
Query: 7 IDIDTRAYFTSATIIIAVPTGIKIXR*LATIHGTQINYN---PNIL*RLGFVFLFTVGGL 177
+ I R + +T+I+A +G+ + TI T Y+ P + L + F + G
Sbjct: 291 LPIVLREWVNLSTLILATGSGLTVLNLGLTIF-TSRKYDWKDPVGMGALISLIGFILAGA 349
Query: 178 TGVILANSSIDITLHDTYYVVAHFH 252
++L +SI+ H++YYVV HFH
Sbjct: 350 QALVLPENSINPLFHNSYYVVGHFH 374
>UniRef50_Q9EMW4 Cluster: AMV085; n=1; Amsacta moorei entomopoxvirus
'L'|Rep: AMV085 - Amsacta moorei entomopoxvirus (AmEPV)
Length = 204
Score = 36.3 bits (80), Expect = 0.65
Identities = 17/65 (26%), Positives = 37/65 (56%)
Frame = +2
Query: 266 RSSICNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRL 445
++ + N G+Y +I Y+ + LY K IF +I++ KYN++ + + +N + F +
Sbjct: 10 KTMVLNNDGLYDIIP--YKASLSILYNKKIIFNDIFFIKYNLYESRVDKKKFNNAISFLM 67
Query: 446 SRLIY 460
++ I+
Sbjct: 68 NKNIF 72
>UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=3; Magnetospirillum|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 560
Score = 36.3 bits (80), Expect = 0.65
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 142 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 252
L + +GG++GV + I+I +H+T YV HFH
Sbjct: 351 LSLILFGFLGGISGVTMGVEQINIMIHNTIYVPGHFH 387
>UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1;
Rhodothermus marinus|Rep: Heme-copper oxygen reductase -
Rhodothermus marinus (Rhodothermus obamensis)
Length = 561
Score = 35.5 bits (78), Expect = 1.1
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +1
Query: 121 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 252
+P++ +L + F GG+TG+I A+ +++ +H+T +V HFH
Sbjct: 346 DPSLSAQLLAMITFVFGGITGLINASFTMNQVVHNTTWVPGHFH 389
>UniRef50_Q94ZM7 Cluster: COI protein; n=2; Sessilia|Rep: COI
protein - Balanus crenatus
Length = 58
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +2
Query: 548 NQRINLFSLNLPSSIE*YQNLPPAEHSYNELP 643
+QR +FS NL S++E PP HSY+ELP
Sbjct: 22 SQRPTIFSPNLSSNLEWVHTTPPHYHSYDELP 53
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 34.7 bits (76), Expect = 2.0
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 151 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 252
+ LF GG G+I A+ +I++ +H+T ++ HFH
Sbjct: 359 MILFAFGGAGGLINASYNINLVVHNTSWISGHFH 392
>UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Cytochrome-c oxidase -
Halorubrum lacusprofundi ATCC 49239
Length = 597
Score = 34.7 bits (76), Expect = 2.0
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 157 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 252
+F GG +G++ A +I+ +H+T +V HFH
Sbjct: 358 MFAAGGFSGMVNAGMNINYMIHNTIWVPGHFH 389
>UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8;
Bacillaceae|Rep: Cytochrome c oxidase subunit I -
Bacillus halodurans
Length = 564
Score = 34.3 bits (75), Expect = 2.6
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 151 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 252
+ F GG+ G+I A+ ++ +H+T +VV HFH
Sbjct: 353 MLFFIPGGIGGIINASFQLNEVVHNTLWVVGHFH 386
>UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1;
Methylococcus capsulatus|Rep: Cytochrome c oxidase,
subunit I - Methylococcus capsulatus
Length = 537
Score = 34.3 bits (75), Expect = 2.6
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +1
Query: 121 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 252
NP +L + + + +GG G++ A+ +++ +H+T +V HFH
Sbjct: 327 NPMVLAAILSLLMLVLGGFGGIVNASYAMNAMVHNTAWVPGHFH 370
>UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal
oxidase; n=8; Sulfolobaceae|Rep: Heme bearing subunit I
of the terminal oxidase - Sulfolobus solfataricus
Length = 593
Score = 33.9 bits (74), Expect = 3.5
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +1
Query: 43 TIIIAVPTGIKIXR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLH 222
T + +P+ + AT G + +N + G+TG+ A S D +H
Sbjct: 316 TYSVVIPSMMTFFNLWATAKGADVKWNIITAWTVTSFAGAIAAGVTGISNATISFDAIVH 375
Query: 223 DTYYVVAHFH 252
+T +VV HFH
Sbjct: 376 NTDWVVGHFH 385
>UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1;
Jannaschia sp. CCS1|Rep: Cytochrome c oxidase subunit I
- Jannaschia sp. (strain CCS1)
Length = 155
Score = 33.1 bits (72), Expect = 6.0
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +1
Query: 184 VILANSSIDITLHDTYYVVAHFH 252
+ L+ D T HDTYYVVAH H
Sbjct: 29 IALSQPGADGTYHDTYYVVAHIH 51
>UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxidase;
n=6; cellular organisms|Rep: Subunit I-homologue of
cytochrome oxidase - Natronomonas pharaonis
(Natronobacterium pharaonis)
Length = 581
Score = 33.1 bits (72), Expect = 6.0
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 157 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 252
+F +G++ A +I+ +H+T++VV HFH
Sbjct: 350 MFAAAAFSGMVNAGMNINYLVHNTWWVVGHFH 381
>UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome c ba(3) subunit I); n=4; Deinococci|Rep:
Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome
c oxidase polypeptide I) (Cytochrome c ba(3) subunit I)
- Thermus thermophilus
Length = 108
Score = 32.7 bits (71), Expect = 8.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 160 FTVGGLTGVILANSSIDITLHDTYYVVAHFH 252
F GG G++ A+ ++D +H+T +V HFH
Sbjct: 21 FIPGGAGGIVNASFTLDYVVHNTAWVPGHFH 51
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 430,042,872
Number of Sequences: 1657284
Number of extensions: 6415611
Number of successful extensions: 15862
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 15290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15837
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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