Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0245
(690 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 54 1e-07
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 54 1e-07
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 52 3e-07
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 52 3e-07
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 52 3e-07
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 52 3e-07
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 52 3e-07
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 52 3e-07
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 47 1e-05
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 47 1e-05
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 45 4e-05
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 45 4e-05
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 41 7e-04
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 41 7e-04
AL132949-21|CAB61098.1| 866|Caenorhabditis elegans Hypothetical... 29 2.4
Z81532-2|CAB04324.1| 290|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical pr... 29 4.1
U50069-1|AAB37559.2| 884|Caenorhabditis elegans Hypothetical pr... 29 4.1
AL021493-6|CAA16394.2| 781|Caenorhabditis elegans Hypothetical ... 29 4.1
AL032648-3|CAA21695.1| 319|Caenorhabditis elegans Hypothetical ... 28 5.5
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 28 7.2
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 28 7.2
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 28 7.2
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 28 7.2
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 28 7.2
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z66499-7|CAA91298.2| 407|Caenorhabditis elegans Hypothetical pr... 27 9.6
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 27 9.6
AF016447-1|AAG24019.1| 341|Caenorhabditis elegans Seven tm rece... 27 9.6
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 54.0 bits (124), Expect = 1e-07
Identities = 22/65 (33%), Positives = 43/65 (66%)
Frame = +2
Query: 311 GVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNR 490
GVE K+ N+V+V+ + +++ ++ + +++DFS+ AAK++N +VE +TN +
Sbjct: 77 GVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGK 136
Query: 491 IKDLV 505
IKDL+
Sbjct: 137 IKDLI 141
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/40 (42%), Positives = 28/40 (70%)
Frame = +1
Query: 535 AVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 654
A LVNA+YFK W SKF + T+ R+F+ S+ ++ ++P +
Sbjct: 151 AFLVNAMYFKADWQSKFAKESTTGREFFTSEAESRQIPFL 190
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 54.0 bits (124), Expect = 1e-07
Identities = 22/65 (33%), Positives = 43/65 (66%)
Frame = +2
Query: 311 GVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNR 490
GVE K+ N+V+V+ + +++ ++ + +++DFS+ AAK++N +VE +TN +
Sbjct: 77 GVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFVENHTNGK 136
Query: 491 IKDLV 505
IKDL+
Sbjct: 137 IKDLI 141
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/47 (36%), Positives = 32/47 (68%)
Frame = +1
Query: 535 AVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYK 675
A LVNA+YFK W SKF + T+ R+F+ S+ ++ ++P + + +++
Sbjct: 151 AFLVNAMYFKADWQSKFAKESTTGREFFTSEAESRQIPFLTELDEHR 197
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/84 (28%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +2
Query: 257 DAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSK 433
+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 62 EQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDN 121
Query: 434 NTVAAKSINDWVEENTNNRIKDLV 505
A++IN++V ENT + IK ++
Sbjct: 122 KEATAEAINNFVRENTGDHIKKII 145
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 535 AVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMY 657
AVL NA+YFK W +KF + T +F+ S D ++ ++
Sbjct: 156 AVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLH 196
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/84 (28%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +2
Query: 257 DAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSK 433
+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 62 EQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDN 121
Query: 434 NTVAAKSINDWVEENTNNRIKDLV 505
A++IN++V ENT + IK ++
Sbjct: 122 KEATAEAINNFVRENTGDHIKKII 145
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 535 AVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMY 657
AVL NA+YFK W +KF + T +F+ S D ++ ++
Sbjct: 156 AVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLH 196
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/84 (28%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +2
Query: 257 DAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSK 433
+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 62 EQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDN 121
Query: 434 NTVAAKSINDWVEENTNNRIKDLV 505
A++IN++V ENT + IK ++
Sbjct: 122 KEATAEAINNFVRENTGDHIKKII 145
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 535 AVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMY 657
AVL NA+YFK W +KF + T +F+ S D ++ ++
Sbjct: 156 AVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLH 196
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/84 (28%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +2
Query: 257 DAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSK 433
+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 62 EQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDN 121
Query: 434 NTVAAKSINDWVEENTNNRIKDLV 505
A++IN++V ENT + IK ++
Sbjct: 122 KEATAEAINNFVRENTGDHIKKII 145
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 535 AVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMY 657
AVL NA+YFK W +KF + T +F+ S D ++ ++
Sbjct: 156 AVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLH 196
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/84 (28%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +2
Query: 257 DAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSK 433
+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 62 EQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDN 121
Query: 434 NTVAAKSINDWVEENTNNRIKDLV 505
A++IN++V ENT + IK ++
Sbjct: 122 KEATAEAINNFVRENTGDHIKKII 145
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 535 AVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMY 657
AVL NA+YFK W +KF + T +F+ S D ++ ++
Sbjct: 156 AVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLH 196
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/84 (28%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +2
Query: 257 DAIRTEFASKSRDLRSI-KGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSK 433
+ + FA+ S L + +G E+K+AN V+ G K+ +++ + ++N+ ++DF
Sbjct: 62 EQLEQHFANISAALLAAERGTEVKLANHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDN 121
Query: 434 NTVAAKSINDWVEENTNNRIKDLV 505
A++IN++V ENT + IK ++
Sbjct: 122 KEATAEAINNFVRENTGDHIKKII 145
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 535 AVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMY 657
AVL NA+YFK W +KF + T +F+ S D ++ ++
Sbjct: 156 AVLTNALYFKADWQNKFKKDSTFKSEFFSSADSKREIDFLH 196
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/68 (30%), Positives = 40/68 (58%)
Frame = +2
Query: 302 SIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENT 481
S+ VE +AN+++V + + F R+ +N++ IDF K+ AAK +N ++ E+T
Sbjct: 84 SVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISEST 143
Query: 482 NNRIKDLV 505
+I D++
Sbjct: 144 KGKIPDMI 151
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +1
Query: 535 AVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGE 684
A+L+NAI+F+G W KF E ++ +F +S + VPM+ + DY Y +
Sbjct: 161 AILINAIFFQGDWRRKFGE--PAESNFSISATENRLVPMLRETRDYFYNK 208
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/68 (30%), Positives = 40/68 (58%)
Frame = +2
Query: 302 SIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENT 481
S+ VE +AN+++V + + F R+ +N++ IDF K+ AAK +N ++ E+T
Sbjct: 84 SVNDVETLIANRLFVSPEQAIRKAFTDELREHYNAETATIDFKKSQEAAKIMNQFISEST 143
Query: 482 NNRIKDLV 505
+I D++
Sbjct: 144 KGKIPDMI 151
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +1
Query: 535 AVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGE 684
A+L+NAI+F+G W KF E ++ +F +S + VPM+ + DY Y +
Sbjct: 161 AILINAIFFQGDWRRKFGE--PAESNFSISATENRLVPMLRETRDYFYNK 208
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/80 (28%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +2
Query: 275 FASKSRDLRS-IKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAK 451
F+ S+++++ KGVE+ +ANKVY+ G ++ F + + +D +++D + A +
Sbjct: 67 FSFVSKEVKNGTKGVEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT-TPAAVQ 125
Query: 452 SINDWVEENTNNRIKDLVNR 511
IN +V TN +IK++ +
Sbjct: 126 EINSFVNTATNGKIKNIATQ 145
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 535 AVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 654
A+L+N+IYFK W KFD S++DF + + K+ M
Sbjct: 153 ALLINSIYFKADWDDKFDGMSVSEQDFTLHTGEKKKIKFM 192
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/80 (28%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +2
Query: 275 FASKSRDLRS-IKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAAK 451
F+ S+++++ KGVE+ +ANKVY+ G ++ F + + +D +++D + A +
Sbjct: 67 FSFVSKEVKNGTKGVEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLT-TPAAVQ 125
Query: 452 SINDWVEENTNNRIKDLVNR 511
IN +V TN +IK++ +
Sbjct: 126 EINSFVNTATNGKIKNIATQ 145
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 535 AVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 654
A+L+N+IYFK W KFD S++DF + + K+ M
Sbjct: 153 ALLINSIYFKADWDDKFDGMSVSEQDFTLHTGEKKKIKFM 192
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 535 AVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKR-GDYKYGES 687
AVL NA YFK W +KF + T R+F+ S++ + ++ R + KY E+
Sbjct: 165 AVLTNAFYFKANWQTKFKKESTYKREFFSSENSKRETEFLHSRNSNRKYSEN 216
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 535 AVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKR-GDYKYGES 687
AVL NA YFK W +KF + T R+F+ S++ + ++ R + KY E+
Sbjct: 165 AVLTNAFYFKANWQTKFKKESTYKREFFSSENSKRETEFLHSRNSNRKYSEN 216
>AL132949-21|CAB61098.1| 866|Caenorhabditis elegans Hypothetical
protein Y53F4B.24 protein.
Length = 866
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 574 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESA 690
S +FD+ L +D Y +KD+ ++ R D++Y A
Sbjct: 648 SGQFDQTLYNDLTLYTAKDEETDETLVSNRSDFEYTNDA 686
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 574 SSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESA 690
S +FD+ L +D Y +KD+ ++ R D++Y A
Sbjct: 140 SGQFDQILYNDLTLYTAKDEETDETLVSNRSDFEYTNDA 178
>Z81532-2|CAB04324.1| 290|Caenorhabditis elegans Hypothetical
protein F36F2.2 protein.
Length = 290
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 231 KALHGFHHQKLKLTEREEAAPKMPRGQRFSL 139
K L H ++ T EE+ P P+GQRF L
Sbjct: 163 KGLEEVHEIEVDKTVIEESIPNQPKGQRFDL 193
>Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical
protein F20D1.7 protein.
Length = 695
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 33 IAIAAMAAVTNLSNVLKN-GNDNFTARMFTEVV-KNNPGKSVVLSAFSVLPPLAQLALAS 206
+A+ ++ + N+L+N G D+ R V+ +NN KS+ + F +P L L L+
Sbjct: 124 MALTSLLELDLSDNMLENLGADSIHIRSIQRVILRNNQIKSIGVHVFRYMPTLKMLDLSG 183
Query: 207 DGET 218
+ T
Sbjct: 184 NNMT 187
>U50069-1|AAB37559.2| 884|Caenorhabditis elegans Hypothetical
protein C09B9.3 protein.
Length = 884
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 5/93 (5%)
Frame = -3
Query: 475 FFYPIVNRLSCDCILREINVLDVRIEDVPGNDCKILV*FSTIMNVYFIRHFKLNA----- 311
+++PIV C++ + V + + + +D V F N+Y + +
Sbjct: 268 YYFPIVTVFQFICLMGWLKVAEALLNPLGEDDDDFEVNFLIDSNIYMTMSYNCDVATDSY 327
Query: 310 FN*SKITAFTREFCSYSIVSGKPIAFKSSSWVS 212
FN K+ FT+ +I+ +K S W S
Sbjct: 328 FNFFKVNPFTKSTYKNNIIFQILFRWKGSVWKS 360
>AL021493-6|CAA16394.2| 781|Caenorhabditis elegans Hypothetical
protein Y51A2B.6 protein.
Length = 781
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +2
Query: 422 DFSKNTVAAKSINDWVEENTNNRIKDLVNRTRSAQPQRLFSSTPSISREHGVLNL 586
+F KN + I+D ++EN+NN+ ++N + + S S+ +G+L+L
Sbjct: 589 EFLKNLAKVREISDKMKENSNNK-TFVMNALSFNKSDSIKSIVSSVQNVYGLLDL 642
>AL032648-3|CAA21695.1| 319|Caenorhabditis elegans Hypothetical
protein Y54G9A.4 protein.
Length = 319
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 681 SIFIIAAFIHHGYFDCFVFAHVEVTVTGQSL 589
SI +AFI H +F+CF F E V+ S+
Sbjct: 172 SIIFTSAFILHVFFECFAFGIQEDAVSVTSI 202
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -3
Query: 298 KITAFTREFCSYSIVSGKPIAFKSSSW 218
K+T T EF + + GKP+ + + W
Sbjct: 5887 KVTTGTAEFAAPEVAEGKPVGYYTDMW 5913
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -3
Query: 298 KITAFTREFCSYSIVSGKPIAFKSSSW 218
K+T T EF + + GKP+ + + W
Sbjct: 6416 KVTTGTAEFAAPEVAEGKPVGYYTDMW 6442
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -3
Query: 298 KITAFTREFCSYSIVSGKPIAFKSSSW 218
K+T T EF + + GKP+ + + W
Sbjct: 6097 KVTTGTAEFAAPEVAEGKPVGYYTDMW 6123
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -3
Query: 298 KITAFTREFCSYSIVSGKPIAFKSSSW 218
K+T T EF + + GKP+ + + W
Sbjct: 5887 KVTTGTAEFAAPEVAEGKPVGYYTDMW 5913
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -3
Query: 298 KITAFTREFCSYSIVSGKPIAFKSSSW 218
K+T T EF + + GKP+ + + W
Sbjct: 6416 KVTTGTAEFAAPEVAEGKPVGYYTDMW 6442
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -3
Query: 298 KITAFTREFCSYSIVSGKPIAFKSSSW 218
K+T T EF + + GKP+ + + W
Sbjct: 6097 KVTTGTAEFAAPEVAEGKPVGYYTDMW 6123
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -3
Query: 298 KITAFTREFCSYSIVSGKPIAFKSSSW 218
K+T T EF + + GKP+ + + W
Sbjct: 5306 KVTTGTAEFAAPEVAEGKPVGYYTDMW 5332
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = -2
Query: 122 FGKHSGCEVIVSIFEHIREICDG--CHCRDG---DSKQTNDCLHV 3
FG + GC+ I + ++ DG CHCRDG D + +C+ +
Sbjct: 4095 FGNNGGCKHICT------DVRDGFYCHCRDGFRPDPQSPKECIDI 4133
>Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical
protein F57C7.4 protein.
Length = 1484
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 117 TEVVKNNPGKSVVLSAFSVLPPLAQLAL 200
T ++KN P KS V +F++ P QLA+
Sbjct: 674 TTIIKNVPSKSDVFVSFTIPPAGTQLAM 701
>Z66499-7|CAA91298.2| 407|Caenorhabditis elegans Hypothetical
protein T01B7.5a protein.
Length = 407
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/49 (24%), Positives = 31/49 (63%)
Frame = +2
Query: 359 KLDENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLV 505
++D++ A ++ D+F+ D ++ + + TV +++ ++ EEN + K +V
Sbjct: 124 QIDKSTAAIA-DLFDDDDEDEEEKEETVEVETVLEFNEENARTKNKKIV 171
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = -2
Query: 122 FGKHSGCEVIVSIFEHIREICDG--CHCRDG---DSKQTNDCLHV 3
FG + GC+ I + ++ DG CHCRDG D + +C+ +
Sbjct: 4095 FGNNGGCKHICT------DVRDGFYCHCRDGFRPDPQSPKECIDI 4133
>AF016447-1|AAG24019.1| 341|Caenorhabditis elegans Seven tm
receptor protein 31 protein.
Length = 341
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 150 VVLSAFSVLPPLAQLALASDGETHEELLKAI-GFPDTMLYEQNSRVKAVIFDQ 305
V++ +FS+ PP+ L L + +KAI P T+L + + + +F Q
Sbjct: 284 VIVCSFSIYPPIDSLILMLIVPEYRNAIKAIFKRPSTILNPKTTNRSSTVFSQ 336
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,747,728
Number of Sequences: 27780
Number of extensions: 290047
Number of successful extensions: 901
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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