Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0245
(690 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi... 56 2e-08
At2g25240.1 68415.m03020 serpin, putative / serine protease inhi... 55 5e-08
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi... 54 9e-08
At2g14540.1 68415.m01628 serpin family protein / serine protease... 47 1e-05
At1g47710.1 68414.m05302 serpin, putative / serine protease inhi... 46 2e-05
At1g63280.1 68414.m07154 serpin-related / serine protease inhibi... 45 4e-05
At2g35580.1 68415.m04357 serpin family protein / serine protease... 44 7e-05
At1g51330.1 68414.m05772 serpin-related / serine protease inhibi... 44 1e-04
At1g64030.1 68414.m07252 serpin family protein / serine protease... 43 2e-04
At1g62170.1 68414.m07013 serpin family protein / serine protease... 39 0.003
At4g00690.1 68417.m00094 Ulp1 protease family protein similar to... 30 1.3
At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 30 1.3
At5g08230.1 68418.m00965 PWWP domain-containing protein putative... 30 1.7
At4g04500.1 68417.m00653 protein kinase family protein contains ... 30 1.7
At5g37490.1 68418.m04515 U-box domain-containing protein similar... 29 2.2
At5g08510.1 68418.m01009 pentatricopeptide (PPR) repeat-containi... 29 2.2
At1g33390.1 68414.m04133 helicase domain-containing protein simi... 29 2.2
At3g01420.1 68416.m00065 pathogen-responsive alpha-dioxygenase, ... 29 2.9
At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containi... 29 3.8
At1g67620.1 68414.m07706 expressed protein contains Pfam domain ... 28 5.1
At1g77460.1 68414.m09020 C2 domain-containing protein / armadill... 28 6.7
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 27 8.9
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 27 8.9
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 27 8.9
At4g04490.1 68417.m00651 protein kinase family protein contains ... 27 8.9
At1g16760.1 68414.m02013 protein kinase family protein contains ... 27 8.9
>At2g26390.1 68415.m03167 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 389
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = +1
Query: 538 VLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGD 669
+L NA+YFK AWS KFD +LT D DF++ T+KVP M D
Sbjct: 168 ILANAVYFKAAWSRKFDAKLTKDNDFHLLDGNTVKVPFMMSYKD 211
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/78 (21%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 320 LKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSKNTVAA-KSINDWVEENTNNRIK 496
L A+ V++ L +F + + + + +DF+ V +N W + +TN IK
Sbjct: 89 LSTAHGVWIDKSSYLKPSFKELLENSYKASCSQVDFATKPVEVIDEVNIWADVHTNGLIK 148
Query: 497 DLVNRTRSAQPQRLFSST 550
+++R + + + +ST
Sbjct: 149 QILSRDCTDTIKEIRNST 166
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +3
Query: 66 LSNVLKNGNDNFTARMFTEVVKNNP--GKSVVLSAFSVLPPLAQLALASDGETHEELLKA 239
L ++N N N AR+ +V++ + G +VV S S+ L+ +A S+ T EE+L
Sbjct: 3 LGKSIENQN-NVVARLAKKVIETDVANGSNVVFSPMSINVLLSLIAAGSNPVTKEEILSF 61
Query: 240 IGFPDT 257
+ P T
Sbjct: 62 LMSPST 67
>At2g25240.1 68415.m03020 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 324
Score = 54.8 bits (126), Expect = 5e-08
Identities = 22/43 (51%), Positives = 30/43 (69%)
Frame = +1
Query: 526 ATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 654
++ VL NA+YFKGAWSSKFD +T DF++ ++KVP M
Sbjct: 99 SSTLVLANAVYFKGAWSSKFDANMTKKNDFHLLDGTSVKVPFM 141
Score = 34.7 bits (76), Expect = 0.058
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 314 VELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNR 490
+ L +AN V++ L +F + + + + +DF SK + +N W E +TN
Sbjct: 25 LRLSIANGVWIDKFFSLKLSFKDLLENSYKATCSQVDFASKPSEVIDEVNTWAEVHTNGL 84
Query: 491 IKDLVNR 511
IK +++R
Sbjct: 85 IKQILSR 91
>At3g45220.1 68416.m04880 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 393
Score = 54.0 bits (124), Expect = 9e-08
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Frame = +1
Query: 538 VLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM--YKRGDYKY 678
+L NA+YFKGAWS KFD +LT DF++ +KVP M YK+ +Y
Sbjct: 168 ILANAVYFKGAWSKKFDAKLTKSYDFHLLDGTMVKVPFMTNYKKQYLEY 216
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 314 VELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFS-KNTVAAKSINDWVEENTNNR 490
+ L A V++ +F + + +N+ +DF+ K +N W E +TN
Sbjct: 90 LHLSTAYGVWIDKSLSFKPSFKDLLENSYNATCNQVDFATKPAEVINEVNAWAEVHTNGL 149
Query: 491 IKDLVN 508
IK++++
Sbjct: 150 IKEILS 155
>At2g14540.1 68415.m01628 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 407
Score = 46.8 bits (106), Expect = 1e-05
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +1
Query: 547 NAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 654
NA+YFKGAW FD+ +T D+ F++ K++ VP M
Sbjct: 198 NALYFKGAWEKAFDKSMTRDKPFHLLNGKSVSVPFM 233
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/87 (21%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +2
Query: 257 DAIRTEFASKS-RDLRSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDFSK 433
+AI E AS +D G ++ N V++ + ++ + + F + +DF
Sbjct: 99 NAIFHELASVVFKDGSETGGPKIAAVNGVWMEQSLSCNPDWEDLFLNFFKASFAKVDFRH 158
Query: 434 NTVAAK-SINDWVEENTNNRIKDLVNR 511
+ +N W +TN+ IK+++ R
Sbjct: 159 KAEEVRLDVNTWASRHTNDLIKEILPR 185
>At1g47710.1 68414.m05302 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 391
Score = 46.0 bits (104), Expect = 2e-05
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +1
Query: 529 TAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 654
T + NA+YFKG W+ KFDE LT + +F++ + P M
Sbjct: 163 TKLIFANALYFKGTWNEKFDESLTQEGEFHLLDGNKVTAPFM 204
>At1g63280.1 68414.m07154 serpin-related / serine protease
inhibitor-related similar to protein zx [Hordeum vulgare
subsp. vulgare] GI:19071, serpin [Triticum aestivum]
GI:1885346
Length = 120
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/42 (47%), Positives = 27/42 (64%)
Frame = +1
Query: 529 TAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 654
T V NA+YFKGAW +KFD+ T D +F+ K+ + VP M
Sbjct: 41 TVQVYGNALYFKGAWENKFDKSSTKDNEFHQGKE--VHVPFM 80
>At2g35580.1 68415.m04357 serpin family protein / serine protease
inhibitor family protein similar to protein zx [Hordeum
vulgare subsp. vulgare] GI:19071, serpin [Triticum
aestivum] GI:1885350; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 374
Score = 44.4 bits (100), Expect = 7e-05
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +1
Query: 529 TAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 654
T + NA++F G W S+FD LT D DF++ ++VP M
Sbjct: 164 TDHIFANALFFNGRWDSQFDPSLTKDSDFHLLDGTKVRVPFM 205
>At1g51330.1 68414.m05772 serpin-related / serine protease
inhibitor-related similar to serpin [Hordeum vulgare
subsp. vulgare] CAA64599.1 GI:1197577
Length = 193
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +1
Query: 529 TAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKY 678
T + NA+YFKGAW +KF + +T + F++ K + VP M K + KY
Sbjct: 64 TIKIYGNALYFKGAWENKFGKSMTIHKPFHLVNGKQVLVPFM-KSYERKY 112
>At1g64030.1 68414.m07252 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311, serpin [Triticum
aestivum] GI:871551; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 385
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 529 TAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 654
T + NA+ FKGAW F++ T D DFY+ ++ VP M
Sbjct: 164 TNKIYANALSFKGAWKRPFEKYYTRDNDFYLVNGTSVSVPFM 205
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 293 DLRSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWV 469
D + G ++ AN +++ D F + + F + +DF S+ K +N WV
Sbjct: 84 DRSATGGPKITAANGLWIDKSLPTDPKFKDLFENFFKAVYVPVDFRSEAEEVRKEVNSWV 143
Query: 470 EENTNNRIKDLV 505
E +TNN IKDL+
Sbjct: 144 EHHTNNLIKDLL 155
>At1g62170.1 68414.m07013 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
GI:9937311 from [Cucurbita maxima]; contains Pfam
profile PF00079: Serpin (serine protease inhibitor)
Length = 433
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 529 TAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 654
T V +A+YFKG W K+ + +T + FY+ ++ VP M
Sbjct: 228 TDRVYGSALYFKGTWEEKYSKSMTKCKPFYLLNGTSVSVPFM 269
Score = 31.9 bits (69), Expect = 0.41
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Frame = +2
Query: 335 KVYVHDGGKLDENFAV--VSRDVF----NSDVQNIDF-SKNTVAAKSINDWVEENTNNRI 493
K+ V +G +D++ +V +S+D+F ++ +DF SK +N W +TN I
Sbjct: 156 KIAVVNGMWMDQSLSVNPLSKDLFKNFFSAAFAQVDFRSKAEEVRTEVNAWASSHTNGLI 215
Query: 494 KDLVNR 511
KDL+ R
Sbjct: 216 KDLLPR 221
>At4g00690.1 68417.m00094 Ulp1 protease family protein similar to
SUMO-1/Smt3-specific isopeptidase 2 [Mus musculus]
GI:16118473, sentrin/SUMO-specific protease [Homo
sapiens] GI:6906859; contains Pfam profile PF02902: Ulp1
protease family, C-terminal catalytic domain
Length = 242
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 416 NIDFSKNTVAAKSINDWVEENTNNRIKDLVNRTRSAQPQRLF 541
NID S T+ N W+ ++ N +L+ ++ PQ+ F
Sbjct: 32 NIDISGETLQCLRPNQWLNDDVTNLYLELLKERQTRDPQKYF 73
>At1g72410.1 68414.m08374 COP1-interacting protein-related similar
to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis
thaliana] GI:3327870
Length = 1163
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 161 REDNAFPWIIFHYFGKHSGCEVIVSIFEHIREICDG 54
R D +++F KHS CE+ VS E ++ G
Sbjct: 2 RSDTVLDYVVFELSPKHSKCELFVSSNEQTEKLASG 37
>At5g08230.1 68418.m00965 PWWP domain-containing protein putative
transcription factor (HUA2) - Arabidopsis thaliana,
EMBL:AF116556
Length = 1445
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 383 VSRDVF-NSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNRTRSAQPQRLFSSTPSI 559
VSRD F N ID ++ A + + +++++ +KDL+ ++ + Q +P +
Sbjct: 695 VSRDTFVNLSADVIDVNQENGNAPLFSFGMSDSSSSCMKDLIAAAQAKRKQAHSQFSPFV 754
Query: 560 SREHGVLNL 586
+ +H LN+
Sbjct: 755 NLDHNSLNI 763
>At4g04500.1 68417.m00653 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 646
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
Frame = +3
Query: 219 HEELLKAIGF-----PDTMLYE--QNSRVKAVIFDQLKALSLKWRIKYTFM 350
H L+K +GF + ++YE NS + IFD+ K L W ++YT +
Sbjct: 398 HRNLVKLLGFCNEKDEEILVYEFVPNSSLDHFIFDEEKRRVLTWDVRYTII 448
>At5g37490.1 68418.m04515 U-box domain-containing protein similar to
immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 435
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 185 ERRQHRKCREDNAFPWIIFHYFGKHSGCEVIVSIFEHI 72
E ++RKC +N+ W++ F K SG E + + I
Sbjct: 153 ESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTFMLNEI 190
>At5g08510.1 68418.m01009 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 511
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +3
Query: 60 TNLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKA 239
T +S +NGN + +MF + K+ K ++ SVLP A L G E +
Sbjct: 184 TVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARE 243
Query: 240 IGFPDTMLYEQNSRVK 287
GF D +Y N+ ++
Sbjct: 244 NGFFDN-IYVCNATIE 258
>At1g33390.1 68414.m04133 helicase domain-containing protein similar
to kurz protein [Drosophila melanogaster] GI:5869803;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1237
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +3
Query: 120 EVVKN--NPGKSVVLSAFSVLPPLAQLALASDGETHEELL 233
E VKN +PGK VL +++L P AQL + + E E L+
Sbjct: 636 EQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLV 675
>At3g01420.1 68416.m00065 pathogen-responsive alpha-dioxygenase,
putative similar to pathogen-inducible alpha-dioxygenase
[Nicotiana attenuata] GI:12539609; contains Pfam profile
PF03098: Animal haem peroxidase
Length = 639
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +2
Query: 365 DENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNRTRSAQPQRLFS 544
DE V DV++ DV+ +D +A K I + T I L+ TR + R F+
Sbjct: 516 DEEAIEVLDDVYDGDVEELDLLVGLMAEKKIKGFAISETAFYI-FLIMATRRLEADRFFT 574
Query: 545 S 547
S
Sbjct: 575 S 575
>At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 613
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 158 EDNAFPWIIFHYFGKHSGCEVIVSIFEHIRE 66
+D F ++ +GKH CE + IFE +RE
Sbjct: 434 KDPVFWNVMISGYGKHGECESAIEIFELLRE 464
>At1g67620.1 68414.m07706 expressed protein contains Pfam domain
PF02410: Domain of unknown function DUF143
Length = 184
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 500 LVNRTRSAQPQRLFSSTPSISREHGVLNL 586
L+N++ P R+F+S+PS S G+ N+
Sbjct: 13 LLNQSWKLAPNRIFASSPSFSSSAGISNV 41
>At1g77460.1 68414.m09020 C2 domain-containing protein /
armadillo/beta-catenin repeat family protein similar to
CCLS 65 [Silene latifolia] GI:2570102; contains Pfam
profiles PF00514: Armadillo/beta-catenin-like repeat,
PF00168: C2 domain
Length = 2110
Score = 27.9 bits (59), Expect = 6.7
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = +3
Query: 30 TIAIAAMAAVTNLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASD 209
T+ +A + A+ L ++L++ + EV+ NNP + + PL+Q L D
Sbjct: 1687 TVQMAELGAIDALLDLLRSHQCEEESGSLLEVIFNNPRVRELKLCKYAIAPLSQYLL--D 1744
Query: 210 GETHEE---LLKAIGFPDTMLYEQNSR 281
T E LL A+ D +E SR
Sbjct: 1745 PHTRSEPGRLLAALALGDLSQHEGLSR 1771
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +3
Query: 198 LASDGETHEELLKAIGFPDTM--LYEQNSRVKAVIFDQLKAL 317
L + GE H+ L AIG P+ + LY +S + +V FD + L
Sbjct: 32 LVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVL 73
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +3
Query: 198 LASDGETHEELLKAIGFPDTM--LYEQNSRVKAVIFDQLKAL 317
L + GE H+ L AIG P+ + LY +S + +V FD + L
Sbjct: 32 LVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVL 73
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +3
Query: 198 LASDGETHEELLKAIGFPDTM--LYEQNSRVKAVIFDQLKAL 317
L + GE H+ L AIG P+ + LY +S + +V FD + L
Sbjct: 125 LVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGL 166
>At4g04490.1 68417.m00651 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 658
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Frame = +3
Query: 219 HEELLKAIGF-----PDTMLYEQ--NSRVKAVIFDQLKALSLKWRIKY 341
H L+K +GF + ++YE NS + IFD+ K L W ++Y
Sbjct: 393 HRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFIFDEDKRWLLTWDVRY 440
>At1g16760.1 68414.m02013 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 758
Score = 27.5 bits (58), Expect = 8.9
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 12/91 (13%)
Frame = -3
Query: 445 CDCILREINVLDVRIEDVPGNDCKILV*FSTIMNV-----------YFIRHFKLNAFN*S 299
C C +EI+ LDV +EDV + K +V + T+ + F+R FK + +
Sbjct: 84 CYCSRKEIHCLDVVLEDV--DKVKAIVEYVTVSAIENLVLGAPSRNSFMRRFKTDL--PT 139
Query: 298 KITAFTREFCS-YSIVSGKPIAFKSSSWVSP 209
++ +FC+ Y I GK + +++S ++P
Sbjct: 140 SVSKAAPDFCNVYVISKGKISSLRNASRLAP 170
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,957,578
Number of Sequences: 28952
Number of extensions: 272864
Number of successful extensions: 926
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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