Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0244
(749 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein. 27 0.82
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 25 2.5
AY062432-1|AAL47188.1| 391|Anopheles gambiae putative odorant r... 24 5.8
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol... 24 5.8
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 24 5.8
AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein pr... 24 5.8
AF387858-1|AAL58708.1| 209|Anopheles gambiae integrase protein. 24 5.8
AF387857-1|AAL58707.1| 215|Anopheles gambiae integrase protein. 24 5.8
AF387850-1|AAL58705.1| 209|Anopheles gambiae integrase protein. 24 5.8
AY745229-1|AAU93509.1| 56|Anopheles gambiae glutaredoxin protein. 23 7.6
AJ970251-1|CAI96723.1| 131|Anopheles gambiae putative reverse t... 23 7.6
>CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein.
Length = 659
Score = 26.6 bits (56), Expect = 0.82
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 10/54 (18%)
Frame = +3
Query: 150 RTGSRGSFKRRRAFPPRHHS-ARLERNTVRPPI---------LSTRTVPPNRVS 281
R+ SRGS R R R S R R+ R P+ L+ RT+PP RV+
Sbjct: 430 RSRSRGSRSRSRTSQSRSRSKTRTSRSRSRTPLPARGHVRARLTRRTIPPTRVA 483
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 25.0 bits (52), Expect = 2.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 112 VPPQSNSPPGSVLEPDHAVVLNG 180
+PP SNS P S PD VV++G
Sbjct: 868 MPPSSNSSPSSYPSPD--VVISG 888
>AY062432-1|AAL47188.1| 391|Anopheles gambiae putative odorant
receptor Or5 protein.
Length = 391
Score = 23.8 bits (49), Expect = 5.8
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 246 ISAGARCFVPSVQSGDVAET 187
ISAG CFV Q G++A+T
Sbjct: 360 ISAGKFCFVDIEQFGNMAKT 379
>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
protein.
Length = 1344
Score = 23.8 bits (49), Expect = 5.8
Identities = 10/18 (55%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
Frame = +1
Query: 133 PPGSVLEP-DHAVVLNGD 183
PPGS+L+P D A V+ G+
Sbjct: 1092 PPGSILDPSDGAAVVGGN 1109
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 23.8 bits (49), Expect = 5.8
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 510 DEAFGYLKRVIVTPAVYPRLLEFLHV-DIQSTGQKSHC 620
D +F L RV TPA P +EFL + D + HC
Sbjct: 635 DASFNRLTRV--TPATIPNSIEFLFLNDNHIVHVEPHC 670
>AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein
protein.
Length = 942
Score = 23.8 bits (49), Expect = 5.8
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 219 ERNTVRPPILSTRTVPPNRVSNETMKVVVF 308
E TVR ST+ VPP R T V +F
Sbjct: 386 EELTVRRSSRSTKGVPPQRFRETTGMVRIF 415
>AF387858-1|AAL58708.1| 209|Anopheles gambiae integrase protein.
Length = 209
Score = 23.8 bits (49), Expect = 5.8
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 219 ERNTVRPPILSTRTVPPNRVSNETMKVVVF 308
E TVR ST+ VPP R T V +F
Sbjct: 156 EELTVRRSSRSTKGVPPQRFRETTGMVRIF 185
>AF387857-1|AAL58707.1| 215|Anopheles gambiae integrase protein.
Length = 215
Score = 23.8 bits (49), Expect = 5.8
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 219 ERNTVRPPILSTRTVPPNRVSNETMKVVVF 308
E TVR ST+ VPP R T V +F
Sbjct: 162 EELTVRRSSRSTKGVPPQRFRETTGMVRIF 191
>AF387850-1|AAL58705.1| 209|Anopheles gambiae integrase protein.
Length = 209
Score = 23.8 bits (49), Expect = 5.8
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 219 ERNTVRPPILSTRTVPPNRVSNETMKVVVF 308
E TVR ST+ VPP R T V +F
Sbjct: 156 EELTVRRSSRSTKGVPPQRFRETTGMVRIF 185
>AY745229-1|AAU93509.1| 56|Anopheles gambiae glutaredoxin protein.
Length = 56
Score = 23.4 bits (48), Expect = 7.6
Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 4/24 (16%)
Frame = -1
Query: 158 SGSRTLP----GGEFDWGGTSVKE 99
+G+RT+P GG F GGT +K+
Sbjct: 21 TGARTVPRVFIGGNFVGGGTDIKK 44
>AJ970251-1|CAI96723.1| 131|Anopheles gambiae putative reverse
transcriptase protein.
Length = 131
Score = 23.4 bits (48), Expect = 7.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 477 SLIHSCASLISDEAFGYLKRVIVT 548
SL++ C SLIS G+ R VT
Sbjct: 22 SLLNCCRSLISTRQHGFFPRRSVT 45
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 799,156
Number of Sequences: 2352
Number of extensions: 17403
Number of successful extensions: 39
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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