Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0244
(749 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC047409-1|AAH47409.1| 539|Homo sapiens karyopherin alpha 5 (im... 32 1.9
AL132795-6|CAI20501.1| 142|Homo sapiens karyopherin alpha 5 (im... 32 1.9
AL132795-5|CAI20500.1| 539|Homo sapiens karyopherin alpha 5 (im... 32 1.9
AL603764-10|CAI14494.1| 2412|Homo sapiens deleted in malignant b... 31 3.3
AL603764-8|CAI14496.1| 2413|Homo sapiens deleted in malignant br... 31 3.3
AL603764-7|CAI14495.1| 2413|Homo sapiens deleted in malignant br... 31 3.3
AL603764-5|CAI14488.1| 2413|Homo sapiens deleted in malignant br... 31 3.3
AL603764-3|CAI14487.1| 2413|Homo sapiens deleted in malignant br... 31 3.3
AL603764-2|CAI14492.1| 2403|Homo sapiens deleted in malignant br... 31 3.3
AL603764-1|CAI14489.1| 2542|Homo sapiens deleted in malignant br... 31 3.3
AJ243224-1|CAB63942.1| 2403|Homo sapiens DMBT1/8kb.1 protein pro... 31 3.3
AJ243212-1|CAB56155.1| 2412|Homo sapiens DMBT1/8kb.2 protein pro... 31 3.3
AJ243211-1|CAB63941.1| 2426|Homo sapiens DMBT1 prototype protein. 31 3.3
AF159456-1|AAD49696.1| 2413|Homo sapiens gp-340 variant protein ... 31 3.3
X04701-1|CAA28407.1| 705|Homo sapiens protein ( Human mRNA for ... 31 4.4
M14058-1|AAA51851.1| 705|Homo sapiens C1R protein. 31 4.4
BC035220-1|AAH35220.1| 705|Homo sapiens complement component 1,... 31 4.4
AB083037-1|BAC19850.2| 705|Homo sapiens r subcomponent of compl... 31 4.4
>BC047409-1|AAH47409.1| 539|Homo sapiens karyopherin alpha 5
(importin alpha 6) protein.
Length = 539
Score = 32.3 bits (70), Expect = 1.9
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +3
Query: 171 FKRRRAFPPRHHSARLERNTVRPPILSTRTVPPNRVSNETMKVVVFQRRSRETIS 335
FKRR + PR+ + LE P I ST +P V M ++F + + ++
Sbjct: 48 FKRRNVYLPRNDESMLESPIQDPDISSTVPIPEEEVVTTDMVQMIFSNNADQQLT 102
>AL132795-6|CAI20501.1| 142|Homo sapiens karyopherin alpha 5
(importin alpha 6) protein.
Length = 142
Score = 32.3 bits (70), Expect = 1.9
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +3
Query: 171 FKRRRAFPPRHHSARLERNTVRPPILSTRTVPPNRVSNETMKVVVFQRRSRETIS 335
FKRR + PR+ + LE P I ST +P V M ++F + + ++
Sbjct: 45 FKRRNVYLPRNDESMLESPIQDPDISSTVPIPEEEVVTTDMVQMIFSNNADQQLT 99
>AL132795-5|CAI20500.1| 539|Homo sapiens karyopherin alpha 5
(importin alpha 6) protein.
Length = 539
Score = 32.3 bits (70), Expect = 1.9
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +3
Query: 171 FKRRRAFPPRHHSARLERNTVRPPILSTRTVPPNRVSNETMKVVVFQRRSRETIS 335
FKRR + PR+ + LE P I ST +P V M ++F + + ++
Sbjct: 48 FKRRNVYLPRNDESMLESPIQDPDISSTVPIPEEEVVTTDMVQMIFSNNADQQLT 102
>AL603764-10|CAI14494.1| 2412|Homo sapiens deleted in malignant
brain tumors 1 protein.
Length = 2412
Score = 31.5 bits (68), Expect = 3.3
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 138 WQCPRTGSRGSFKRRRAFPPRHHSARLERNTVRPPILSTRTVPPNRVSNET 290
W CP G SA R+T RP LST T+PP+ V +E+
Sbjct: 679 WSCPNNGWLSHNCGHHEDAGVICSAAQSRSTPRPDTLSTITLPPSTVGSES 729
>AL603764-8|CAI14496.1| 2413|Homo sapiens deleted in malignant brain
tumors 1 protein.
Length = 2413
Score = 31.5 bits (68), Expect = 3.3
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 138 WQCPRTGSRGSFKRRRAFPPRHHSARLERNTVRPPILSTRTVPPNRVSNET 290
W CP G SA R+T RP LST T+PP+ V +E+
Sbjct: 679 WSCPNNGWLSHNCGHHEDAGVICSAAQSRSTPRPDTLSTITLPPSTVGSES 729
>AL603764-7|CAI14495.1| 2413|Homo sapiens deleted in malignant brain
tumors 1 protein.
Length = 2413
Score = 31.5 bits (68), Expect = 3.3
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 138 WQCPRTGSRGSFKRRRAFPPRHHSARLERNTVRPPILSTRTVPPNRVSNET 290
W CP G SA R+T RP LST T+PP+ V +E+
Sbjct: 679 WSCPNNGWLSHNCGHHEDAGVICSAAQSRSTPRPDTLSTITLPPSTVGSES 729
>AL603764-5|CAI14488.1| 2413|Homo sapiens deleted in malignant brain
tumors 1 protein.
Length = 2413
Score = 31.5 bits (68), Expect = 3.3
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 138 WQCPRTGSRGSFKRRRAFPPRHHSARLERNTVRPPILSTRTVPPNRVSNET 290
W CP G SA R+T RP LST T+PP+ V +E+
Sbjct: 679 WSCPNNGWLSHNCGHHEDAGVICSAAQSRSTPRPDTLSTITLPPSTVGSES 729
>AL603764-3|CAI14487.1| 2413|Homo sapiens deleted in malignant brain
tumors 1 protein.
Length = 2413
Score = 31.5 bits (68), Expect = 3.3
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 138 WQCPRTGSRGSFKRRRAFPPRHHSARLERNTVRPPILSTRTVPPNRVSNET 290
W CP G SA R+T RP LST T+PP+ V +E+
Sbjct: 679 WSCPNNGWLSHNCGHHEDAGVICSAAQSRSTPRPDTLSTITLPPSTVGSES 729
>AL603764-2|CAI14492.1| 2403|Homo sapiens deleted in malignant brain
tumors 1 protein.
Length = 2403
Score = 31.5 bits (68), Expect = 3.3
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 138 WQCPRTGSRGSFKRRRAFPPRHHSARLERNTVRPPILSTRTVPPNRVSNET 290
W CP G SA R+T RP LST T+PP+ V +E+
Sbjct: 669 WSCPNNGWLSHNCGHHEDAGVICSAAQSRSTPRPDTLSTITLPPSTVGSES 719
>AL603764-1|CAI14489.1| 2542|Homo sapiens deleted in malignant brain
tumors 1 protein.
Length = 2542
Score = 31.5 bits (68), Expect = 3.3
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 138 WQCPRTGSRGSFKRRRAFPPRHHSARLERNTVRPPILSTRTVPPNRVSNET 290
W CP G SA R+T RP LST T+PP+ V +E+
Sbjct: 679 WSCPNNGWLSHNCGHHEDAGVICSAAQSRSTPRPDTLSTITLPPSTVGSES 729
>AJ243224-1|CAB63942.1| 2403|Homo sapiens DMBT1/8kb.1 protein
protein.
Length = 2403
Score = 31.5 bits (68), Expect = 3.3
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 138 WQCPRTGSRGSFKRRRAFPPRHHSARLERNTVRPPILSTRTVPPNRVSNET 290
W CP G SA R+T RP LST T+PP+ V +E+
Sbjct: 669 WSCPNNGWLSHNCGHHEDAGVICSAAQSRSTPRPDTLSTITLPPSTVGSES 719
>AJ243212-1|CAB56155.1| 2412|Homo sapiens DMBT1/8kb.2 protein
protein.
Length = 2412
Score = 31.5 bits (68), Expect = 3.3
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 138 WQCPRTGSRGSFKRRRAFPPRHHSARLERNTVRPPILSTRTVPPNRVSNET 290
W CP G SA R+T RP LST T+PP+ V +E+
Sbjct: 679 WSCPNNGWLSHNCGHHEDAGVICSAAQSRSTPRPDTLSTITLPPSTVGSES 729
>AJ243211-1|CAB63941.1| 2426|Homo sapiens DMBT1 prototype protein.
Length = 2426
Score = 31.5 bits (68), Expect = 3.3
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 138 WQCPRTGSRGSFKRRRAFPPRHHSARLERNTVRPPILSTRTVPPNRVSNET 290
W CP G SA R+T RP LST T+PP+ V +E+
Sbjct: 692 WSCPNNGWLSHNCGHHEDAGVICSAAQSRSTPRPDTLSTITLPPSTVGSES 742
>AF159456-1|AAD49696.1| 2413|Homo sapiens gp-340 variant protein
protein.
Length = 2413
Score = 31.5 bits (68), Expect = 3.3
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 138 WQCPRTGSRGSFKRRRAFPPRHHSARLERNTVRPPILSTRTVPPNRVSNET 290
W CP G SA R+T RP LST T+PP+ V +E+
Sbjct: 679 WSCPNNGWLSHNCGHHEDAGVICSAAQSRSTPRPDTLSTITLPPSTVGSES 729
>X04701-1|CAA28407.1| 705|Homo sapiens protein ( Human mRNA for
complement component C1r. ).
Length = 705
Score = 31.1 bits (67), Expect = 4.4
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 485 D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 375
D + HCPY + A G +GE GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279
>M14058-1|AAA51851.1| 705|Homo sapiens C1R protein.
Length = 705
Score = 31.1 bits (67), Expect = 4.4
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 485 D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 375
D + HCPY + A G +GE GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279
>BC035220-1|AAH35220.1| 705|Homo sapiens complement component 1, r
subcomponent protein.
Length = 705
Score = 31.1 bits (67), Expect = 4.4
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 485 D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 375
D + HCPY + A G +GE GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279
>AB083037-1|BAC19850.2| 705|Homo sapiens r subcomponent of
complement component 1 protein.
Length = 705
Score = 31.1 bits (67), Expect = 4.4
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 485 D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 375
D + HCPY + A G +GE GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,145,383
Number of Sequences: 237096
Number of extensions: 2486921
Number of successful extensions: 6655
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6646
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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