Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0243
         (774 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    27   0.49 
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        26   1.5  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    25   3.4  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          24   4.5  

>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 27.5 bits (58), Expect = 0.49
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = -1

Query: 711  RIPFVRASSELTVERRSYRMCRSRTKRNRHDLRLGRSAEGRRTRVRI 571
            R+P    ++E+   RR+Y   + R  R R D  LG   +GR+ R RI
Sbjct: 1115 RLPPSPRTTEMRRRRRNYMQLQYR--RRRRDGELGDVPQGRQRRGRI 1159


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -2

Query: 131 NSSRTSRRRLQATL 90
           NSSRT+ RRLQATL
Sbjct: 350 NSSRTAIRRLQATL 363


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -2

Query: 440 RIRFPSKPDTPRSSEPILIPKLRIQFADFPYL 345
           R+R  +   TP+    +++PKL+ + A  P+L
Sbjct: 5   RLRLITSFGTPQDKRTMVLPKLKDETAVMPFL 36


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -1

Query: 678  TVERRSYRMCRSRTKRNRHDLRLGRSAEGRRTRVRIQ 568
            T  RRS  +   R +RN H L   R+    R  V +Q
Sbjct: 1037 TTHRRSQTLSPVRNERNYHTLTTTRTHSTERPFVAVQ 1073


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 861,833
Number of Sequences: 2352
Number of extensions: 19496
Number of successful extensions: 77
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 77
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)