Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0238
         (754 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.86 
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   8.0  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   8.0  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    21   8.0  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   8.0  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   8.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 13/58 (22%), Positives = 25/58 (43%)
 Frame = +3

Query: 288 LFYNDRAIKITDAKYGYSIKLTPGQNKAIINISDNTNVRSSWVFKPLWESNKLYFKIW 461
           ++Y  RA  I    +  +  L P ++   +N+      RS  +   +W S +  F +W
Sbjct: 298 IYYFCRAFIIFPTHFYCAFSLYPLKSTFYLNVVRPFPERSMGITPMIWNSTRRLFVVW 355


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 245 PVVHSLYEKSTRLRILSDINFEIVS*SSLTL 153
           PV   L +    L ILSD+   + + +SLTL
Sbjct: 125 PVYKELTDIKLVLNILSDVTLWLSNVNSLTL 155


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 245 PVVHSLYEKSTRLRILSDINFEIVS*SSLTL 153
           PV   L +    L ILSD+   + + +SLTL
Sbjct: 51  PVYKELTDIKLVLNILSDVTLWLSNVNSLTL 81


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/43 (25%), Positives = 19/43 (44%)
 Frame = +1

Query: 109 DYDHAASIAKRLHTNNVSELQETISKLISDKIRNLVDFSYRLW 237
           D     + A  + T N  E+ E +S L  DK+  + +    +W
Sbjct: 226 DTSKQLAAALGMQTTNEKEIFERLSALPVDKLLQISEKVANIW 268


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/43 (25%), Positives = 19/43 (44%)
 Frame = +1

Query: 109 DYDHAASIAKRLHTNNVSELQETISKLISDKIRNLVDFSYRLW 237
           D     + A  + T N  E+ E +S L  DK+  + +    +W
Sbjct: 228 DTSKQLAAALGMQTTNEKEIFERLSALPVDKLLQISEEVANIW 270


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = +1

Query: 439 TSSTSKFGMRTPIPTLNSAKRMPRYSTTNRLGQSQQRKIP 558
           TSS   F +   +PT  S   +  Y+  ++ G +    +P
Sbjct: 364 TSSNHPFSINRLLPTAESKADIKMYADMHQYGYNTLSPLP 403


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,765
Number of Sequences: 336
Number of extensions: 3729
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)