Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0237
         (721 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    25   0.82 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    24   1.1  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    22   4.4  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    22   4.4  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    22   4.4  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 24.6 bits (51), Expect = 0.82
 Identities = 10/38 (26%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -3

Query: 686 IVMIFNIIFFYLTIVL-KTFQIFKIHVDYFKIFTNWVK 576
           +V  FNI+F+  T++L + F++  + +   + F+  +K
Sbjct: 42  VVSTFNIVFYMYTLILEERFKLINLIIKQEEFFSPKIK 79


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -3

Query: 698 LHQYIVMIFNIIFFYLTIVLKTFQIFKI 615
           L  Y++ IF  +FF++ I++  +   +I
Sbjct: 93  LRHYLIFIFVNVFFWVIILMSNYAFTRI 120


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 582 PISKDFEIVNMNFEDLKCF*DNSQIKKYDVKNHYY 686
           PI+ DFE+   NF  L+   D S++   ++K  YY
Sbjct: 334 PIT-DFELAVPNFLKLQRGSDISKLVAKNIKEFYY 367


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 582 PISKDFEIVNMNFEDLKCF*DNSQIKKYDVKNHYY 686
           PI+ DFE+   NF  L+   D S++   ++K  YY
Sbjct: 334 PIT-DFELAVPNFLKLQRGSDISKLVAKNIKEFYY 367


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 582 PISKDFEIVNMNFEDLKCF*DNSQIKKYDVKNHYY 686
           PI+ DFE+   NF  L+   D S++   ++K  YY
Sbjct: 333 PIT-DFELAVPNFLKLQRGSDISKLVAKNIKEFYY 366


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,068
Number of Sequences: 336
Number of extensions: 3333
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)