Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0236
         (818 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        26   1.6  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    25   3.7  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   6.5  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    24   6.5  
Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein...    23   8.6  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   8.6  

>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -2

Query: 130 NSSRTSRRRLQATL 89
           NSSRT+ RRLQATL
Sbjct: 350 NSSRTAIRRLQATL 363


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -2

Query: 439 RIRFPSKPDTPRSSEPILIPKLRIQFADFPYL 344
           R+R  +   TP+    +++PKL+ + A  P+L
Sbjct: 5   RLRLITSFGTPQDKRTMVLPKLKDETAVMPFL 36


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = -3

Query: 336 LSTRGSSPWRPAADMGTNRRD-ISTYIPP*IFKVRREYPDTAANAVLFAFRTISP 175
           ++T  + P   A+    N  + IS+  PP     RR + +T+A++ + +  TI+P
Sbjct: 507 ITTTNTHPKSSASSTSLNHSNPISSSAPPSSIVSRRRFFNTSASSSVTSEGTITP 561


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = -3

Query: 336 LSTRGSSPWRPAADMGTNRRD-ISTYIPP*IFKVRREYPDTAANAVLFAFRTISP 175
           ++T  + P   A+    N  + IS+  PP     RR + +T+A++ + +  TI+P
Sbjct: 508 ITTTNTHPKSSASSTSLNHSNPISSSAPPSSIVSRRRFFNTSASSSVTSEGTITP 562


>Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein
           protein.
          Length = 192

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = -3

Query: 720 LDSRIPLVRASSELTVERRSYRIVPIAHETKPTRLTARKIRGRP 589
           + + + L     E  V+     I+P A  +KPT  T + I  +P
Sbjct: 17  IGASVGLPTVDEENVVQAEQLPILPTADSSKPTDDTVKAIAPQP 60


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 677 PLNGGRTESCRSRTKRNR 624
           P +GGR  SCRS   R R
Sbjct: 262 PRSGGRWPSCRSPPARRR 279


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 919,791
Number of Sequences: 2352
Number of extensions: 20702
Number of successful extensions: 51
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86902827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)