Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0236
(818 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 31 1.3
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 29 5.3
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical pr... 28 7.0
AF022971-12|AAG23974.3| 229|Caenorhabditis elegans Hypothetical... 28 7.0
AC024777-5|AAF60564.1| 506|Caenorhabditis elegans Hypothetical ... 28 7.0
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = -3
Query: 432 ASRPNPTRPGPQSQSLFRSYGSNLPTSLTYIILSTR-GSSP--WRPAADMGTNR 280
A P P+ P P ++ +S NLP S+ + R G SP W P A TNR
Sbjct: 408 APPPVPSNPPPSNEQQSQSRVQNLPDSVRSAVSPRRSGKSPRQWPPPAMPTTNR 461
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = -3
Query: 432 ASRPNPTRPGPQSQSLFRSYGSNLPTSLTYIILSTR-GSSP--WRPAADMGTNR 280
A P P+ P P ++ +S NLP S+ + R G SP W P A TNR
Sbjct: 408 APPPVPSNPPPSNEQQSQSRVQNLPDSVRSAVSPRRSGKSPRQWPPPAMPTTNR 461
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -3
Query: 462 TSTRPGTGASASRPNPTRPGPQSQSLFRSYGSNLPTSLT 346
TST P T S + P P+ P S SNL ++LT
Sbjct: 297 TSTVPSTTTSTTTPKPSSPSTAEASTTPVLTSNLTSALT 335
>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical
protein F16A11.3b protein.
Length = 1364
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 272 SPRTSLPEFSRSAESIRTPPQMRCSSRSEPYLPSIG 165
SPR F + I T P+ + +S SEP P+ G
Sbjct: 702 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 737
>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical
protein F16A11.3a protein.
Length = 1490
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 272 SPRTSLPEFSRSAESIRTPPQMRCSSRSEPYLPSIG 165
SPR F + I T P+ + +S SEP P+ G
Sbjct: 828 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 863
>Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 272 SPRTSLPEFSRSAESIRTPPQMRCSSRSEPYLPSIG 165
SPR F + I T P+ + +S SEP P+ G
Sbjct: 828 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 863
>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical
protein F16A11.3b protein.
Length = 1364
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 272 SPRTSLPEFSRSAESIRTPPQMRCSSRSEPYLPSIG 165
SPR F + I T P+ + +S SEP P+ G
Sbjct: 702 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 737
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical
protein F16A11.3a protein.
Length = 1490
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 272 SPRTSLPEFSRSAESIRTPPQMRCSSRSEPYLPSIG 165
SPR F + I T P+ + +S SEP P+ G
Sbjct: 828 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 863
>Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 272 SPRTSLPEFSRSAESIRTPPQMRCSSRSEPYLPSIG 165
SPR F + I T P+ + +S SEP P+ G
Sbjct: 828 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 863
>AF022971-12|AAG23974.3| 229|Caenorhabditis elegans Hypothetical
protein C31B8.1 protein.
Length = 229
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -3
Query: 444 TGASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSP 313
T A +P + P +Q LF S+G LP I + SSP
Sbjct: 11 TMAITRSKSPFKASPSNQKLFISFGVGLPIFFQMCIFTASYSSP 54
>AC024777-5|AAF60564.1| 506|Caenorhabditis elegans Hypothetical
protein Y42H9AR.1 protein.
Length = 506
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Frame = -1
Query: 470 THEHRPDPAPA---HPLPVQTRHAPVLRANP 387
+HEH P PAPA P PVQ +A P
Sbjct: 330 SHEHSPSPAPAPVSSPTPVQQYQQSYSQAQP 360
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,052,766
Number of Sequences: 27780
Number of extensions: 457303
Number of successful extensions: 1530
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1528
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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