Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0233
(457 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A5K548 Cluster: WD domain, G-beta repeat domain contain... 38 0.14
UniRef50_A5E7Z3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.31
UniRef50_Q21196 Cluster: Putative uncharacterized protein; n=2; ... 36 0.41
UniRef50_Q24CF4 Cluster: Putative uncharacterized protein; n=1; ... 34 1.3
UniRef50_UPI0000D56166 Cluster: PREDICTED: hypothetical protein;... 34 1.7
UniRef50_Q5DBI3 Cluster: SJCHGC04855 protein; n=1; Schistosoma j... 33 2.9
UniRef50_Q4SNF6 Cluster: Chromosome 8 SCAF14543, whole genome sh... 33 3.8
UniRef50_P0C2X8 Cluster: Cell division cycle-associated protein ... 32 5.1
UniRef50_UPI0000585143 Cluster: PREDICTED: hypothetical protein;... 32 6.7
UniRef50_Q2LVY1 Cluster: Hydrogenase maturation protein; n=1; Sy... 32 6.7
UniRef50_Q869V0 Cluster: Similar to Homo sapiens (Human). High-r... 32 6.7
UniRef50_A1A5U9 Cluster: Si:ch211-69g19.2 protein; n=5; Danio re... 31 8.9
>UniRef50_A5K548 Cluster: WD domain, G-beta repeat domain containing
protein; n=8; Plasmodium|Rep: WD domain, G-beta repeat
domain containing protein - Plasmodium vivax
Length = 1846
Score = 37.5 bits (83), Expect = 0.14
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 88 INNKMGSNSSKPTDTSLVLKTELELGNSDPRSPTPEITRTPLQGKNGAKHNITKNMT-SE 264
+N+K+ NSS T + LK+ +++G+SD S + +G N + NI N+ +
Sbjct: 221 LNSKININSSVNMQTDINLKSRIKMGSSDIASANRNMNSVFSKGNNNLRENIMNNLNYNY 280
Query: 265 RRLNLQTEMKN 297
+N MK+
Sbjct: 281 NNVNYNNMMKS 291
>UniRef50_A5E7Z3 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 1017
Score = 36.3 bits (80), Expect = 0.31
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +1
Query: 46 YNYTSYF*SSLL-DYINNKMGSNSSKPTDTSLVLKTELELGNSDPRSPTPEITRTPL--- 213
Y+ TS F +S+ D IN+ MGS SSK +T+ + ++ S TP PL
Sbjct: 2 YSRTSKFQASMANDGINDAMGS-SSKFNNTAATSTSNSTSNSNSNSSSTPNAASNPLTSA 60
Query: 214 QGKNGAKHNITKNMTSERRLNLQTEMKN 297
G NG N +K+ + + + +T KN
Sbjct: 61 NGYNGQNQNHSKSQSHQNFNDTRTSTKN 88
>UniRef50_Q21196 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 88
Score = 35.9 bits (79), Expect = 0.41
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Frame = +1
Query: 106 SNSSKPTDTSLVLKTELELGNSDPRSPTPEITRTPLQGK------NGAKHNITKNMTSER 267
S ++K T +S K+ SDPRSP+ +I RTP+Q K NG+ + T R
Sbjct: 8 SFNAKQTSSSTPQKSTKTPTCSDPRSPSQDIERTPIQVKTVENDENGSSESSTTKADKPR 67
Query: 268 RLNLQTEM 291
+ +L+ +M
Sbjct: 68 KTSLRQKM 75
Score = 34.3 bits (75), Expect = 1.3
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3
Query: 354 DPRSPTQDFERTPIIISSKIND 419
DPRSP+QD ERTPI + + ND
Sbjct: 30 DPRSPSQDIERTPIQVKTVEND 51
>UniRef50_Q24CF4 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 917
Score = 34.3 bits (75), Expect = 1.3
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +1
Query: 82 DYINNKMG--SNSSKPTDTSLVLKTELELGNSDPRSPTPEITRTPLQGKNGAKHNITKNM 255
D+IN + S SSK S L+T+ E + P+SPTP++ K +K N ++
Sbjct: 173 DFINEQQDQISQSSKRKSVSKTLQTQPEQQSGSPKSPTPKVLE-----KQFSKINSQSSI 227
Query: 256 TSERRLNLQ 282
+R LN Q
Sbjct: 228 FLQRNLNKQ 236
>UniRef50_UPI0000D56166 Cluster: PREDICTED: hypothetical protein;
n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
protein - Tribolium castaneum
Length = 332
Score = 33.9 bits (74), Expect = 1.7
Identities = 22/48 (45%), Positives = 29/48 (60%)
Frame = +3
Query: 264 KTFESTNGDEKLIHNNPILSAVIKNHLQSYDPRSPTQDFERTPIIISS 407
KT E+T K+I + P AV N + DPRSPT +F RTPII+ +
Sbjct: 57 KTIENT---PKVIESEPE-DAV--NVVLGIDPRSPTVEFNRTPIIVGA 98
>UniRef50_Q5DBI3 Cluster: SJCHGC04855 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04855 protein - Schistosoma
japonicum (Blood fluke)
Length = 184
Score = 33.1 bits (72), Expect = 2.9
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +1
Query: 139 VLKTELELGNSDPRSPTPEITRTPL 213
+++T +++ DPRSP+P + RTP+
Sbjct: 44 IVRTPIQINKDDPRSPSPGVIRTPI 68
>UniRef50_Q4SNF6 Cluster: Chromosome 8 SCAF14543, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 8
SCAF14543, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 878
Score = 32.7 bits (71), Expect = 3.8
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1
Query: 145 KTELELGNSDPRSPTPEITRTPLQ 216
KTE L + DPRSP+ ITRTP++
Sbjct: 511 KTEWPLASLDPRSPSAGITRTPIR 534
>UniRef50_P0C2X8 Cluster: Cell division cycle-associated protein 3;
n=1; Xenopus laevis|Rep: Cell division cycle-associated
protein 3 - Xenopus laevis (African clawed frog)
Length = 363
Score = 32.3 bits (70), Expect = 5.1
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 321 SAVIKNHLQSY--DPRSPTQDFERTPIIISSKINDLTMTLK 437
S ++NHL S DPRSPT RTPI + + T+K
Sbjct: 13 SRPLRNHLLSRVNDPRSPTSGIPRTPIEVGESPRNTPQTVK 53
>UniRef50_UPI0000585143 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 236
Score = 31.9 bits (69), Expect = 6.7
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 273 ESTNGDEKLIHNNPILSAVIKNHLQSY-DPRSPTQDFERTPI 395
+S NGD K + + + +++ DPRSPT++ +RTP+
Sbjct: 7 KSINGDNKPDEDEQYHTPIANRRVKTLTDPRSPTEEVQRTPV 48
>UniRef50_Q2LVY1 Cluster: Hydrogenase maturation protein; n=1;
Syntrophus aciditrophicus SB|Rep: Hydrogenase maturation
protein - Syntrophus aciditrophicus (strain SB)
Length = 778
Score = 31.9 bits (69), Expect = 6.7
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +3
Query: 267 TFESTNGDEKLIHNNPILSAVIKNHLQSYDPRSPTQDFERT 389
TF+ GD ++ P++ A+++ L +P+ DF RT
Sbjct: 658 TFDIFEGDRIVLDLRPLIRAIVQEQLSGREPQKIASDFHRT 698
>UniRef50_Q869V0 Cluster: Similar to Homo sapiens (Human). High-risk
human papilloma viruses E6 oncoproteins targeted protein
E6TP1 alpha; n=2; Dictyostelium discoideum|Rep: Similar
to Homo sapiens (Human). High-risk human papilloma
viruses E6 oncoproteins targeted protein E6TP1 alpha -
Dictyostelium discoideum (Slime mold)
Length = 855
Score = 31.9 bits (69), Expect = 6.7
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +3
Query: 288 DEKLIHNNPILSAVIKNHLQSYDPRSPTQDFERTPIIISSKINDLTMTLKFRL 446
D+K N I+ + K Q +DP+ DF I+IS +ND + K+++
Sbjct: 732 DKKRHLGNDIVLIIYKEGDQLFDPKVMKSDFNHVFIVISPIVNDKSKIKKYKI 784
>UniRef50_A1A5U9 Cluster: Si:ch211-69g19.2 protein; n=5; Danio
rerio|Rep: Si:ch211-69g19.2 protein - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 450
Score = 31.5 bits (68), Expect = 8.9
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1
Query: 172 DPRSPTPEITRTPLQ 216
DPRSPTP ITRTP++
Sbjct: 68 DPRSPTPGITRTPMK 82
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 419,953,164
Number of Sequences: 1657284
Number of extensions: 8377051
Number of successful extensions: 22963
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 22083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22954
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23931581955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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