Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0233
         (457 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   3.1  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    21   5.5  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    20   9.5  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +3

Query: 348 SYDPRSPTQDF--ERTPIIISSKINDLTMTL 434
           S  PRS  +    +RTP+I  +KIN +  T+
Sbjct: 237 SLRPRSSQKSAPGKRTPLISRAKINTVKQTI 267


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -1

Query: 211 KESVLFQVLEIEGPSYQVLIQFLVPKRCRLVYLNYFP 101
           +E +L  V + + P+Y  L +    KRC    L  FP
Sbjct: 23  REEILSVVGKEKIPTYNDLQELKYTKRCIKETLRLFP 59


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 118 KPTDTSLVLKTELELGNSDPRSPTPE 195
           K    +LVL+  + L   +P   TPE
Sbjct: 202 KKFTNALVLQQHIRLHTGEPTDLTPE 227


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,158
Number of Sequences: 336
Number of extensions: 2295
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)