Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0233
         (457 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450 CY...    24   2.9  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   5.1  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    22   8.9  

>AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450
           CYP12F2 protein.
          Length = 522

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 300 IHNNPILSAVIKNHLQSYDP 359
           +HN P L A IK  L+ Y P
Sbjct: 371 MHNLPYLRACIKEGLRMYQP 390


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 301 INFSSPFVDSNVFL 260
           IN S+PF+DS + L
Sbjct: 534 INMSTPFIDSEIVL 547


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 22.2 bits (45), Expect = 8.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 243 YVMFSAIFSLQRSPCYFRCWRS 178
           YV+FS   S+ R   +  CW S
Sbjct: 303 YVLFSYASSIDRFEVHRYCWMS 324


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 443,717
Number of Sequences: 2352
Number of extensions: 8180
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39119412
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)