Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0233
(457 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29560-7|CAA82659.1| 88|Caenorhabditis elegans Hypothetical pr... 36 0.014
U41550-6|AAL06046.2| 135|Caenorhabditis elegans Hypothetical pr... 30 0.69
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 29 1.2
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 29 1.2
U13019-5|AAC24444.1| 994|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z82269-3|CAB05207.2| 1319|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z82269-2|CAJ76945.1| 1129|Caenorhabditis elegans Hypothetical pr... 28 2.8
AF026205-1|ABD63216.1| 126|Caenorhabditis elegans Hypothetical ... 28 2.8
Z71180-7|CAK55177.1| 647|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z71180-6|CAI79160.1| 702|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z71180-5|CAD44114.1| 363|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z71180-4|CAA94893.2| 723|Caenorhabditis elegans Hypothetical pr... 28 3.7
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 28 3.7
AL021475-8|CAK55192.1| 647|Caenorhabditis elegans Hypothetical ... 28 3.7
AL021475-7|CAI79248.1| 702|Caenorhabditis elegans Hypothetical ... 28 3.7
AL021475-6|CAD44157.1| 363|Caenorhabditis elegans Hypothetical ... 28 3.7
AL021475-5|CAA16314.2| 723|Caenorhabditis elegans Hypothetical ... 28 3.7
AF178536-1|AAD56365.1| 723|Caenorhabditis elegans EGL-9 protein. 28 3.7
AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical ... 28 3.7
Z75529-5|CAA99784.1| 610|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z79695-2|CAB01971.2| 1008|Caenorhabditis elegans Hypothetical pr... 27 6.5
U42439-2|AAA83506.1| 162|Caenorhabditis elegans Hypothetical pr... 27 6.5
AL023816-2|CAA19431.1| 355|Caenorhabditis elegans Hypothetical ... 27 6.5
>Z29560-7|CAA82659.1| 88|Caenorhabditis elegans Hypothetical
protein K03H1.7 protein.
Length = 88
Score = 35.9 bits (79), Expect = 0.014
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Frame = +1
Query: 106 SNSSKPTDTSLVLKTELELGNSDPRSPTPEITRTPLQGK------NGAKHNITKNMTSER 267
S ++K T +S K+ SDPRSP+ +I RTP+Q K NG+ + T R
Sbjct: 8 SFNAKQTSSSTPQKSTKTPTCSDPRSPSQDIERTPIQVKTVENDENGSSESSTTKADKPR 67
Query: 268 RLNLQTEM 291
+ +L+ +M
Sbjct: 68 KTSLRQKM 75
Score = 34.3 bits (75), Expect = 0.043
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3
Query: 354 DPRSPTQDFERTPIIISSKIND 419
DPRSP+QD ERTPI + + ND
Sbjct: 30 DPRSPSQDIERTPIQVKTVEND 51
>U41550-6|AAL06046.2| 135|Caenorhabditis elegans Hypothetical
protein R04A9.6 protein.
Length = 135
Score = 30.3 bits (65), Expect = 0.69
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 261 RKTFESTNGDEKLIHNNPILSAVIKN---HLQSYDPRSPTQDFERTPIIISSKINDLTMT 431
RK D ++ +NP + +KN H ++ + P+QDF +TP + S + +
Sbjct: 58 RKRMLIFTDDLEMRSSNPKQTYAVKNSSEHPRNKNEEGPSQDFSKTPNLEESFRGSIGYS 117
Query: 432 LKFRLISD 455
L LISD
Sbjct: 118 LLASLISD 125
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 29.5 bits (63), Expect = 1.2
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Frame = +1
Query: 91 NNKMGSNSSKPTDTSLVLKTEL----ELGNSDPRSPTPE 195
NN +NS+ T T L +KTE E DPRSP P+
Sbjct: 68 NNNNNNNSNSTTTTPLEIKTERNQQHEHTTIDPRSPPPK 106
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 29.5 bits (63), Expect = 1.2
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Frame = +1
Query: 91 NNKMGSNSSKPTDTSLVLKTEL----ELGNSDPRSPTPE 195
NN +NS+ T T L +KTE E DPRSP P+
Sbjct: 68 NNNNNNNSNSTTTTPLEIKTERNQQHEHTTIDPRSPPPK 106
>U13019-5|AAC24444.1| 994|Caenorhabditis elegans Hypothetical
protein T12A2.5 protein.
Length = 994
Score = 28.7 bits (61), Expect = 2.1
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +1
Query: 82 DYINNKMGSNSSKPTDTSLVLKTELELGNSDPRSPTPEITRTPLQGKNGAKHNITKNM 255
D INN + S S P D +L T L L + ++ T Q GAK +TKN+
Sbjct: 567 DTINNIILSQKSIPDDVFQLLITTLRLTRRELKNGDSSFTELNSQ-LEGAKTELTKNL 623
>Z82269-3|CAB05207.2| 1319|Caenorhabditis elegans Hypothetical
protein F52G2.2a protein.
Length = 1319
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 196 ITRTPLQGKNGAKHNITKNMTSERRLNLQTEMK 294
I+R P + +NG+KH TK T+ L +M+
Sbjct: 649 ISRLPNEPRNGSKHGSTKRFTTPHVTGLVVDME 681
>Z82269-2|CAJ76945.1| 1129|Caenorhabditis elegans Hypothetical
protein F52G2.2b protein.
Length = 1129
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 196 ITRTPLQGKNGAKHNITKNMTSERRLNLQTEMK 294
I+R P + +NG+KH TK T+ L +M+
Sbjct: 459 ISRLPNEPRNGSKHGSTKRFTTPHVTGLVVDME 491
>AF026205-1|ABD63216.1| 126|Caenorhabditis elegans Hypothetical
protein T23E7.5 protein.
Length = 126
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 44 SIITQVISEALYWTILIIKWEVIQVNQPTPLWY*KLN*NLVTRTLDL 184
S+IT VI AL+ L + W + ++PTP+ K + L+ R + L
Sbjct: 36 SVITYVIIAALFLATLFL-WPIKSADEPTPIEQQKTDIVLIPRVVYL 81
>Z71180-7|CAK55177.1| 647|Caenorhabditis elegans Hypothetical
protein F22E12.4e protein.
Length = 647
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 300 IHNNPILSAVIKNHLQSYDPRSPTQDFERTPIIISSKINDLTMTLKF 440
+ NNPIL+ I N ++ S T+ PI I +I+ T T+ F
Sbjct: 47 LQNNPILNQTISNFPPTFSITSKTEPEPSIPIQIPQRISS-TSTVPF 92
>Z71180-6|CAI79160.1| 702|Caenorhabditis elegans Hypothetical
protein F22E12.4d protein.
Length = 702
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 300 IHNNPILSAVIKNHLQSYDPRSPTQDFERTPIIISSKINDLTMTLKF 440
+ NNPIL+ I N ++ S T+ PI I +I+ T T+ F
Sbjct: 123 LQNNPILNQTISNFPPTFSITSKTEPEPSIPIQIPQRISS-TSTVPF 168
>Z71180-5|CAD44114.1| 363|Caenorhabditis elegans Hypothetical
protein F22E12.4b protein.
Length = 363
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 300 IHNNPILSAVIKNHLQSYDPRSPTQDFERTPIIISSKINDLTMTLKF 440
+ NNPIL+ I N ++ S T+ PI I +I+ T T+ F
Sbjct: 123 LQNNPILNQTISNFPPTFSITSKTEPEPSIPIQIPQRISS-TSTVPF 168
>Z71180-4|CAA94893.2| 723|Caenorhabditis elegans Hypothetical
protein F22E12.4a protein.
Length = 723
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 300 IHNNPILSAVIKNHLQSYDPRSPTQDFERTPIIISSKINDLTMTLKF 440
+ NNPIL+ I N ++ S T+ PI I +I+ T T+ F
Sbjct: 123 LQNNPILNQTISNFPPTFSITSKTEPEPSIPIQIPQRISS-TSTVPF 168
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 145 KTELELGNSDPRSPTPEITRTPLQGKNGAKHNITKNMTSERRLNLQTEMKN 297
KTE L DPRS +R + +H ++ ++ERR +T ++
Sbjct: 1497 KTESPLKRKDPRSKNRSRSRDRARRSRSREHKRARSRSAERRRRSRTRSRS 1547
>AL021475-8|CAK55192.1| 647|Caenorhabditis elegans Hypothetical
protein F22E12.4e protein.
Length = 647
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 300 IHNNPILSAVIKNHLQSYDPRSPTQDFERTPIIISSKINDLTMTLKF 440
+ NNPIL+ I N ++ S T+ PI I +I+ T T+ F
Sbjct: 47 LQNNPILNQTISNFPPTFSITSKTEPEPSIPIQIPQRISS-TSTVPF 92
>AL021475-7|CAI79248.1| 702|Caenorhabditis elegans Hypothetical
protein F22E12.4d protein.
Length = 702
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 300 IHNNPILSAVIKNHLQSYDPRSPTQDFERTPIIISSKINDLTMTLKF 440
+ NNPIL+ I N ++ S T+ PI I +I+ T T+ F
Sbjct: 123 LQNNPILNQTISNFPPTFSITSKTEPEPSIPIQIPQRISS-TSTVPF 168
>AL021475-6|CAD44157.1| 363|Caenorhabditis elegans Hypothetical
protein F22E12.4b protein.
Length = 363
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 300 IHNNPILSAVIKNHLQSYDPRSPTQDFERTPIIISSKINDLTMTLKF 440
+ NNPIL+ I N ++ S T+ PI I +I+ T T+ F
Sbjct: 123 LQNNPILNQTISNFPPTFSITSKTEPEPSIPIQIPQRISS-TSTVPF 168
>AL021475-5|CAA16314.2| 723|Caenorhabditis elegans Hypothetical
protein F22E12.4a protein.
Length = 723
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 300 IHNNPILSAVIKNHLQSYDPRSPTQDFERTPIIISSKINDLTMTLKF 440
+ NNPIL+ I N ++ S T+ PI I +I+ T T+ F
Sbjct: 123 LQNNPILNQTISNFPPTFSITSKTEPEPSIPIQIPQRISS-TSTVPF 168
>AF178536-1|AAD56365.1| 723|Caenorhabditis elegans EGL-9 protein.
Length = 723
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 300 IHNNPILSAVIKNHLQSYDPRSPTQDFERTPIIISSKINDLTMTLKF 440
+ NNPIL+ I N ++ S T+ PI I +I+ T T+ F
Sbjct: 123 LQNNPILNQTISNFPPTFSITSKTEPEPSIPIQIPQRISS-TSTVPF 168
>AC006620-1|AAF39780.1| 754|Caenorhabditis elegans Hypothetical
protein C51G7.3 protein.
Length = 754
Score = 27.9 bits (59), Expect = 3.7
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 145 KTELELGNSDPRSPTPEITRTPLQGKNGAKHNITKNMTSERRLNLQTEMKN 297
KTE L DPRS +R + +H ++ ++ERR +T ++
Sbjct: 122 KTESPLKRKDPRSKNRSRSRDRARRSRSREHKRARSRSAERRRRSRTRSRS 172
>Z75529-5|CAA99784.1| 610|Caenorhabditis elegans Hypothetical
protein C44H9.6 protein.
Length = 610
Score = 27.5 bits (58), Expect = 4.9
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Frame = +1
Query: 49 NYTSYF*SSLLDYINNKMGSNSSKPTDTSLVLKTELELGNS--DPRSP-TPEITR-TPLQ 216
NY Y S + D I ++GSN +D ++TE+ + N DP P T E+ + T L+
Sbjct: 484 NYDEYDRSEISDEIQ-QIGSNDGSLSDGCDFIETEITINNETPDPIEPSTAEVDQHTDLE 542
Query: 217 GKNGAKHNITKNMTSERRLNLQTEMKN*YTITPFY 321
+ K + K RR + + ++ + P+Y
Sbjct: 543 AQ---KLTVLKKKAIRRRTEMMS-YRSFWKKRPYY 573
>Z79695-2|CAB01971.2| 1008|Caenorhabditis elegans Hypothetical
protein F27D4.6 protein.
Length = 1008
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +1
Query: 118 KPTDTSLVLKTELELGNSDPRSPTPEITRTPLQGKNGAKHNITKNMTSERRLNLQTEMK 294
KPT++S+ KT + SP+P R PL + ++ M + ++ ++K
Sbjct: 339 KPTESSIPTKTSNVTSQLNKPSPSPHTQRVPLLSPLASATRSSQKMFIDTLRSIDVKLK 397
>U42439-2|AAA83506.1| 162|Caenorhabditis elegans Hypothetical
protein F19C7.5 protein.
Length = 162
Score = 27.1 bits (57), Expect = 6.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 118 YLNYFPFYY*YSPIKSFRNNLC 53
Y +FP Y SP+ SF +N+C
Sbjct: 68 YSKWFPANYVISPVVSFSSNIC 89
>AL023816-2|CAA19431.1| 355|Caenorhabditis elegans Hypothetical
protein T05G11.3 protein.
Length = 355
Score = 27.1 bits (57), Expect = 6.5
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = -3
Query: 287 SVCRFKRLSEVIFFVMLCLAPFF 219
S+ + K S ++FF++LC+ PF+
Sbjct: 123 SLTKSKYGSRIVFFIVLCMLPFW 145
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,898,623
Number of Sequences: 27780
Number of extensions: 209857
Number of successful extensions: 673
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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