Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0233
(457 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g30740.1 68417.m04356 expressed protein hypothetical protein ... 31 0.49
At4g30710.2 68417.m04353 expressed protein contains Pfam domain,... 31 0.49
At4g30710.1 68417.m04352 expressed protein contains Pfam domain,... 31 0.49
At4g08880.1 68417.m01464 Ulp1 protease family protein contains P... 29 1.1
At3g43220.1 68416.m04562 phosphoinositide phosphatase family pro... 29 2.0
At2g24070.1 68415.m02875 expressed protein contains Pfam domain,... 28 2.6
At1g68790.1 68414.m07863 expressed protein 28 2.6
At1g26190.1 68414.m03196 phosphoribulokinase/uridine kinase fami... 28 3.4
At3g20090.1 68416.m02548 cytochrome P450 family protein similar ... 27 4.5
At1g78720.1 68414.m09175 protein transport protein sec61, putati... 27 6.0
At2g29060.1 68415.m03532 scarecrow transcription factor family p... 27 7.9
At1g30300.1 68414.m03705 expressed protein similar to putative h... 27 7.9
>At4g30740.1 68417.m04356 expressed protein hypothetical protein
T29E15.27 - Arabidopsis thaliana,PID:g3738334
Length = 91
Score = 30.7 bits (66), Expect = 0.49
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +1
Query: 88 INNKMGSNSSKPTDTSLVLKTELELGNSDPRSPTPEITRTPLQGKN 225
+++ G + +P+ +++ K + E S R PTPE R+PL+GKN
Sbjct: 24 VSSSSGDRTLRPS-SNIAQKHKAET-TSVSRKPTPERKRSPLKGKN 67
>At4g30710.2 68417.m04353 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 644
Score = 30.7 bits (66), Expect = 0.49
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +1
Query: 88 INNKMGSNSSKPTDTSLVLKTELELGNSDPRSPTPEITRTPLQGKN 225
+++ G + +P+ +++ K + E S R PTPE R+PL+GKN
Sbjct: 141 VSSSSGDRTLRPS-SNIAQKHKAET-TSVSRKPTPERKRSPLKGKN 184
>At4g30710.1 68417.m04352 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 644
Score = 30.7 bits (66), Expect = 0.49
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +1
Query: 88 INNKMGSNSSKPTDTSLVLKTELELGNSDPRSPTPEITRTPLQGKN 225
+++ G + +P+ +++ K + E S R PTPE R+PL+GKN
Sbjct: 141 VSSSSGDRTLRPS-SNIAQKHKAET-TSVSRKPTPERKRSPLKGKN 184
>At4g08880.1 68417.m01464 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At3g24380, At5g36840,
At5g35010, At3g42740, At4g05290, At2g14770, At3g43390,
At2g05560, At1g34730, At1g27790, At1g34740, At1g27780,
At5g36850, At3g42730, At1g52020, At3g24390, At4g05280,
At1g25886, At4g03300
Length = 1463
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +1
Query: 145 KTELELGNSDPRSPTPEITRTPLQGKNGAKHNITKNMTSERRLNLQTEMKN 297
+TE + + D R P + + P+ GK ++ TK T R+ + T + +
Sbjct: 366 RTEQTIPSHDSREPPTSMDKAPVTGKKPSRRMSTKGSTGTRKSSRLTRVSH 416
>At3g43220.1 68416.m04562 phosphoinositide phosphatase family
protein contains similarity to phosphoinositide
phosphatase SAC1 [Rattus norvegicus]
gi|11095248|gb|AAG29810; contains Pfam domain, PF02383:
SacI homology domain; identical to SAC domain protein 3
(SAC3) GI:31415722
Length = 818
Score = 28.7 bits (61), Expect = 2.0
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 130 CRLVYLNYFPFYY*YSPIKSFRNNLCNYTTSN 35
C + F F Y Y+ ++S++ N+CNY T +
Sbjct: 154 CMVDLTKDFFFSYSYNVMRSYQKNVCNYETGH 185
>At2g24070.1 68415.m02875 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 609
Score = 28.3 bits (60), Expect = 2.6
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 118 KPTDTSLVLKTELELGNSDPRSPTPEITRTPLQGKN 225
+P+ +++ K + E S R TPE R+PL+GKN
Sbjct: 160 RPSSSNIAHKQQSET-TSVTRKQTPERKRSPLKGKN 194
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 28.3 bits (60), Expect = 2.6
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Frame = +1
Query: 166 NSDPRS-PTPEITRTPLQG---KNGAKHNITKNMTSERRLNLQTE 288
N D R P+P+ TRTP +G +NG + + +T E + ++TE
Sbjct: 970 NDDIRKVPSPKETRTPPEGENRENGKAEVLVETVTHEEIVTVETE 1014
>At1g26190.1 68414.m03196 phosphoribulokinase/uridine kinase family
protein weak similarity to SP|Q59190 Uridine kinase (EC
2.7.1.48) (Uridine monophosphokinase) (Cytidine
monophosphokinase) {Borrelia burgdorferi}; contains Pfam
profile PF00485: Phosphoribulokinase / Uridine kinase
family
Length = 674
Score = 27.9 bits (59), Expect = 3.4
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +1
Query: 70 SSLLDYINNKMGSNSSKPTDTSLVLKTELELGNS 171
+S ++ +N+K+ N + PT SL ++TE+ G++
Sbjct: 520 TSRIEELNSKLSCNKNSPTQQSLSIQTEVCNGSA 553
>At3g20090.1 68416.m02548 cytochrome P450 family protein similar to
Cytochrome P450 93A3 (P450 CP5) (SP:O81973) {Glycine
max}; contains Pfam profile: PF00067 cytochrome P450
Length = 386
Score = 27.5 bits (58), Expect = 4.5
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Frame = +3
Query: 258 LRKTFESTNGDEKLIH-----NNPILSAVIKNHLQSYDP 359
LRK +S G +LIH N P L AV+K L+ + P
Sbjct: 201 LRKEIDSVVGKSRLIHETDIPNLPYLQAVVKEGLRLHPP 239
>At1g78720.1 68414.m09175 protein transport protein sec61, putative
similar to SP|P38377 Protein transport protein Sec61
alpha subunit isoform 1 (Sec61 alpha- 1) {Canis
familiaris}; contains Pfam profile PF00344: eubacterial
secY protein
Length = 475
Score = 27.1 bits (57), Expect = 6.0
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = -1
Query: 400 IIMGVRSKS*VGDRGSYDCKWFFITADRMGLLCINFSSPFVDSNVFLRSY 251
+++ VRSK+ G RGSY K F+ + + L S+ + S + R +
Sbjct: 266 VVLPVRSKNARGQRGSYPIKLFYTSNMPIILQSALVSNIYFISQILYRKF 315
>At2g29060.1 68415.m03532 scarecrow transcription factor family
protein
Length = 1336
Score = 26.6 bits (56), Expect = 7.9
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = -3
Query: 302 YQFFISVCRFKRLSEVIF--FVMLCLAPFFPCKGVRVIS-GVGDRGSELPS 159
YQ +ISVC FK+++ +IF ++ LA K + +I G+ D G + PS
Sbjct: 395 YQTYISVCPFKKIA-IIFANHSIMRLASSANAKTIHIIDFGISD-GFQWPS 443
>At1g30300.1 68414.m03705 expressed protein similar to putative
hydrolase GI:7270684 from [Arabidopsis thaliana];
similar to PhnP protein (GI:15620485) [Rickettsia
conorii]
Length = 324
Score = 26.6 bits (56), Expect = 7.9
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 342 LQSYDPRSPTQDFERTPIIISSKINDLTMTLKF 440
++S P SPT D + TPI +S + ++ +KF
Sbjct: 127 IRSVQPFSPTNDIDPTPIFVSQYAME-SLAVKF 158
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,179,369
Number of Sequences: 28952
Number of extensions: 187608
Number of successful extensions: 499
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 752336160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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