Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0227
         (862 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...    24   6.8  
EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.        23   9.0  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   9.0  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   9.0  

>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -1

Query: 352 DAVTCHTQILCRFRCVIKCIYPILSTEVHNVFALSYAVA 236
           D +     +L + +  +  I P+L TEVH   AL  A+A
Sbjct: 424 DGIMASNSLLMQLQADLSGI-PVLRTEVHEPAALGTAMA 461


>EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.
          Length = 421

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +3

Query: 228 SGIATAYDRANTLCTSVDRMGYIHLITQRNLQ 323
           +G     +R NT C  V R     L+T+  LQ
Sbjct: 157 NGTKATAERINTWCEKVTRGRITELVTEDTLQ 188


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 844 ENCFSKPIRTLKYINLINFSLFLHHYLYL 758
           E C +  I  LKYI  ++ +L    Y +L
Sbjct: 38  EYCLNTTIHGLKYIGTVSLTLCERAYFFL 66


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 844 ENCFSKPIRTLKYINLINFSLFLHHYLYL 758
           E C +  I  LKYI  ++ +L    Y +L
Sbjct: 38  EYCLNTTIHGLKYIGTVSLTLCERAYFFL 66


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 906,148
Number of Sequences: 2352
Number of extensions: 19956
Number of successful extensions: 38
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91786122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)