Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0227
         (862 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-963|AAF52283.1|  429|Drosophila melanogaster CG14006-PA...    30   3.6  

>AE014134-963|AAF52283.1|  429|Drosophila melanogaster CG14006-PA
           protein.
          Length = 429

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = +2

Query: 8   EADNFDNYNCFRSRKPRSGSTKR*CAQSIPTRSRLPNQH--TVLQSLFFVRRENSS 169
           E ++ DN   + SR+P   +    C Q  PTRS  P  H  ++ ++L +   ++SS
Sbjct: 370 EQEDQDNALIYESRRPTERNCFNRCHQCTPTRSPRPEPHLTSLYRNLHYSNAKSSS 425


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,209,218
Number of Sequences: 53049
Number of extensions: 795966
Number of successful extensions: 1709
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1709
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)