Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0225
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.15 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    26   0.26 
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    26   0.35 
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    25   0.60 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   0.60 
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   1.8  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   7.4  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    21   7.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 14/59 (23%), Positives = 30/59 (50%)
 Frame = +2

Query: 5   FLFFTLYLKSITTIQFFSEILSVLACNKSKK*FQDYNIMCVHAIGLQRVIIQICLHVYY 181
           F+FF ++L  +  + +F+  L  L C      +  + I  +H +    +II +C++ +Y
Sbjct: 186 FIFFNMHLLFLLCLDYFTLHLLFLPC--IYYFYSAFIIFTIHLLFYCVLIILLCIYYFY 242



 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 5   FLFFTLYLKSITTIQFFSEILSVLAC 82
           F+ FT++L  +  I +F   L +L C
Sbjct: 272 FIIFTMHLLFLLCIYYFYCALIILLC 297


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 7/30 (23%), Positives = 18/30 (60%)
 Frame = -2

Query: 320 VILNFYIERQQKYEYYLCVVHFVTVVIKTF 231
           ++ +++++R Q+Y+YY  + H   +    F
Sbjct: 147 LLFDYFVQRNQEYKYYQILSHLSGIFFTVF 176


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 19/47 (40%), Positives = 22/47 (46%)
 Frame = +3

Query: 123 VYMLLVYKELSYKFVYMCIINNSDQIGINTYWAINAKCFYDNCNKMN 263
           VYM LV   LS   +   II     I I T W+ NAK F  N   +N
Sbjct: 184 VYMTLV--SLSLFIIPASIIATCYAIIIITIWSKNAKGFIKNTKAVN 228


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 115 YYVCTCYWFTKSYHTNLFTC 174
           Y +   +W+T +  TN+F C
Sbjct: 260 YIIVVIFWYTVNASTNIFLC 279


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 115 YYVCTCYWFTKSYHTNLFTC 174
           Y +   +W+T +  TN+F C
Sbjct: 260 YIIVVIFWYTVNASTNIFLC 279


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -2

Query: 602 TKLKKIFKMHKILL 561
           T +KK+F +HKIL+
Sbjct: 131 TTIKKLFNLHKILV 144


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 638 RRAGMATNSRLPSPINFLASHR 703
           +RAG  T S +  P+  +  HR
Sbjct: 183 KRAGPRTESAVYEPVRIMGVHR 204


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -1

Query: 477 FSVAYTKFFHSIR*SQMNIILITY 406
           F + Y K FH +  S  N I   Y
Sbjct: 41  FVIGYVKHFHPLALSNKNAIDFNY 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,542
Number of Sequences: 336
Number of extensions: 4296
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)