Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0223
         (457 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4FSG8 Cluster: Putative uncharacterized protein; n=1; ...    71   9e-12
UniRef50_A5Z1D8 Cluster: Putative uncharacterized protein; n=1; ...    44   0.002
UniRef50_A7FPQ7 Cluster: Conserved domain protein; n=3; Clostrid...    35   0.95 
UniRef50_O15792 Cluster: CG2; n=89; Plasmodium falciparum|Rep: C...    33   3.8  
UniRef50_UPI00006CB08C Cluster: hypothetical protein TTHERM_0024...    32   6.7  
UniRef50_A5K6G0 Cluster: Putative uncharacterized protein; n=1; ...    31   8.9  

>UniRef50_A4FSG8 Cluster: Putative uncharacterized protein; n=1;
           Thermobia domestica|Rep: Putative uncharacterized
           protein - Thermobia domestica (firebrat)
          Length = 53

 Score = 71.3 bits (167), Expect = 9e-12
 Identities = 33/47 (70%), Positives = 39/47 (82%)
 Frame = -3

Query: 254 YLRDNSVIFFFSSNKKKSLRPRCWIKIKFKCRSLKF*SVRSLKSYMI 114
           YLRDNSVIFF +S +++ LRPRCWIKI  +CRSL + SVR LKSYMI
Sbjct: 7   YLRDNSVIFFENSYRQERLRPRCWIKILSRCRSLVYRSVRPLKSYMI 53


>UniRef50_A5Z1D8 Cluster: Putative uncharacterized protein; n=1;
           Haemaphysalis qinghaiensis|Rep: Putative uncharacterized
           protein - Haemaphysalis qinghaiensis
          Length = 30

 Score = 44.0 bits (99), Expect = 0.002
 Identities = 19/30 (63%), Positives = 22/30 (73%)
 Frame = -2

Query: 165 M*KFKILICSIIKILHDLSSNRCEPGWFLS 76
           M K K  +CS  +ILHDLS +RCE GWFLS
Sbjct: 1   MKKLKKEVCSTFEILHDLSLDRCESGWFLS 30


>UniRef50_A7FPQ7 Cluster: Conserved domain protein; n=3; Clostridium
           botulinum A|Rep: Conserved domain protein - Clostridium
           botulinum (strain ATCC 19397 / Type A)
          Length = 479

 Score = 34.7 bits (76), Expect = 0.95
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = -2

Query: 156 FKILICSIIKILHDLSSNRCEPGWFLSFNIYNILVRK 46
           +KI    IIK+++ L  N CE G+  SFN YN + ++
Sbjct: 277 YKISDYRIIKLINALEDNSCEVGYHYSFNSYNSISKR 313


>UniRef50_O15792 Cluster: CG2; n=89; Plasmodium falciparum|Rep: CG2 -
            Plasmodium falciparum
          Length = 2819

 Score = 32.7 bits (71), Expect = 3.8
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = -3

Query: 242  NSVIFFFSSNKKKSLRPRCWIKIKFKCRSLKF*SVRSLKSY 120
            N+ I FF + + K L  R  IK  F  RSLKF     +KSY
Sbjct: 2127 NNYIMFFQTTQNKYLLNRRLIKKAFFLRSLKFDDFNDIKSY 2167


>UniRef50_UPI00006CB08C Cluster: hypothetical protein TTHERM_00241930;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00241930 - Tetrahymena thermophila SB210
          Length = 1086

 Score = 31.9 bits (69), Expect = 6.7
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -1

Query: 439  NYLKRREDPIEFCNLFC-KYFYFYISIILNYFVGVIKKFN*LFLIVY 302
            NYL   +  ++ C L C +  Y YIS I  YF     +FN ++ ++Y
Sbjct: 967  NYLNMVQVDLDKCRLICYQQIYIYISSIKYYFKKKKDQFNQIYALMY 1013


>UniRef50_A5K6G0 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 592

 Score = 31.5 bits (68), Expect = 8.9
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -1

Query: 394 FCKYFYFYISIILNYFVGVIKKFN*LFLIVYIN 296
           + KYF+F+I  ++N  V ++  F  LF + Y N
Sbjct: 364 YIKYFFFFIPYVINLCVNLLINFYILFSVYYYN 396


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 322,618,873
Number of Sequences: 1657284
Number of extensions: 5163727
Number of successful extensions: 8843
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8837
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23931581955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)