Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0223
         (457 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   1.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.1  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   5.5  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   7.2  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
 Frame = +3

Query: 180 NPTSRSQTFL--FI*TKKKNYAVIPKVFFLLI-NKIGSFNHLLM*TIRKS*LNFFIT 341
           N T  + T L  F   + + + ++  +F +++   +G    LL    RKS +N+FIT
Sbjct: 8   NETDSNNTSLDAFYFFETEQFTLLWVLFVIIVAGNVGVLYTLLFGRSRKSRMNYFIT 64


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 397 LFCKYFYFYISIIL 356
           L C Y+++Y  IIL
Sbjct: 97  LLCTYYFYYAFIIL 110



 Score = 20.6 bits (41), Expect = 7.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 406 FCNLFCKYFYFYISII 359
           F  L C Y+++Y  II
Sbjct: 107 FIILLCVYYFYYAFII 122


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 370 ISIILNYFVGVIKKF 326
           ISI+L Y VGV+  F
Sbjct: 23  ISIVLIYTVGVVYSF 37


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 86  QPGSHRFELRSCK 124
           QPG +R +L SCK
Sbjct: 10  QPGVNRCKLLSCK 22


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,047
Number of Sequences: 336
Number of extensions: 1716
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)