Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0220
         (715 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81536-8|CAB04369.2|  352|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z82262-6|CAB05149.1|  374|Caenorhabditis elegans Hypothetical pr...    28   7.6  
AL132847-1|CAB63371.1|  375|Caenorhabditis elegans Hypothetical ...    28   7.6  
AF068708-1|AAC17759.1|  452|Caenorhabditis elegans Hypothetical ...    28   7.6  

>Z81536-8|CAB04369.2|  352|Caenorhabditis elegans Hypothetical
           protein F40D4.11 protein.
          Length = 352

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = +1

Query: 553 FFFFHSKRNNVIQENCVLLTKGILKILYSVVSFNVNVKSLTDVI 684
           + F    R+N + +N   + K   ++LY ++ F +N   L  V+
Sbjct: 126 YIFLFESRSNYLMQNIFRMKKTRTRVLYHLIVFLINASGLIMVL 169


>Z82262-6|CAB05149.1|  374|Caenorhabditis elegans Hypothetical
           protein C43F9.6 protein.
          Length = 374

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
 Frame = -2

Query: 369 CCYNTI---CKNDSDIIVLEFYKTGIPLRYFP 283
           CC   I   C +++D+    F KTGIP  YFP
Sbjct: 280 CCGQGIKFKCTSNADVKFEYFPKTGIPTCYFP 311


>AL132847-1|CAB63371.1|  375|Caenorhabditis elegans Hypothetical
           protein Y48G10A.2 protein.
          Length = 375

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
 Frame = -1

Query: 619 CL*LVKHS-FLV*RY--CAYCGKRKKSTKAP-VFYRK 521
           CL +  HS F    Y  C Y  K+K+S K+P +FYRK
Sbjct: 53  CLQVAPHSQFFACTYPGCGYALKQKESVKSPTLFYRK 89


>AF068708-1|AAC17759.1|  452|Caenorhabditis elegans Hypothetical
           protein C18G1.7 protein.
          Length = 452

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 164 LSDCIIITKNKNICTSIVLFCK 99
           L++CI   K  NIC S V FCK
Sbjct: 411 LNECIEEIKAANICRSTVTFCK 432


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,982,561
Number of Sequences: 27780
Number of extensions: 304778
Number of successful extensions: 661
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)