Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0219
         (645 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    25   1.6  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    24   3.6  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    24   4.7  
AY745229-1|AAU93509.1|   56|Anopheles gambiae glutaredoxin protein.    23   6.3  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   6.3  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   6.3  
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    23   8.3  

>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 251 DGRKRSSPFKTPA*SGSRTLPGGEFDWG 334
           DGR+RSS + T +     TLPG +   G
Sbjct: 13  DGRRRSSVYTTSSGETGITLPGDDHSIG 40


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1

Query: 445 HRDCETRPIDPLV*RVFSKRCR 510
           +RD  TR IDPL  R  S  CR
Sbjct: 52  YRDGSTREIDPLGARATSVDCR 73


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
            protein.
          Length = 1344

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 10/18 (55%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
 Frame = -1

Query: 318  PPGSVLEP-DHAGVLNGD 268
            PPGS+L+P D A V+ G+
Sbjct: 1092 PPGSILDPSDGAAVVGGN 1109


>AY745229-1|AAU93509.1|   56|Anopheles gambiae glutaredoxin protein.
          Length = 56

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 4/24 (16%)
 Frame = +2

Query: 293 SGSRTLP----GGEFDWGGTSVKE 352
           +G+RT+P    GG F  GGT +K+
Sbjct: 21  TGARTVPRVFIGGNFVGGGTDIKK 44


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 339 VPPQSNSPPGSVLEPD 292
           +PP SNS P S   PD
Sbjct: 868 MPPSSNSSPSSYPSPD 883


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 10/82 (12%)
 Frame = -1

Query: 336 PPQSNSP----PGSVLEPDHAGVLNG------DERFRPSPLCTLGTKHRAPADIIDRAPL 187
           PPQ +S     P S L PDH G  +        E+ RP+ L +  +  ++P+ I   A  
Sbjct: 551 PPQQHSMLRTGPKS-LAPDHEGDNDSGVDEYTQEKDRPNALASPASPLKSPSKIPGLARR 609

Query: 186 PPNRVSNETMKVVVFQRRSRET 121
           P N  S    +    QR + +T
Sbjct: 610 PENISSESRSRSTSKQRANAKT 631


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +1

Query: 118 DRFARSSLKNHYFHCFITYSVGRKRC 195
           DRFA ++    + H F+ +  G + C
Sbjct: 425 DRFALAATHARHTHAFLPFGDGPRNC 450


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,935
Number of Sequences: 2352
Number of extensions: 14890
Number of successful extensions: 34
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)